Variant report

Variant	rs61950132
Chromosome Location	chr13:53821163-53821164
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12868253	1.00[AFR][1000 genomes]
rs34110102	1.00[AFR][1000 genomes]
rs34374288	1.00[AFR][1000 genomes]
rs34708622	1.00[AFR][1000 genomes]
rs34820311	1.00[AFR][1000 genomes]
rs35404249	1.00[AFR][1000 genomes]
rs35412628	1.00[AFR][1000 genomes]
rs55702516	0.82[EUR][1000 genomes]
rs59486247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs61950078	1.00[AFR][1000 genomes]
rs61950134	0.82[EUR][1000 genomes]
rs61950298	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs61952460	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61952467	1.00[AFR][1000 genomes]
rs9563145	0.82[EUR][1000 genomes]
rs9563147	0.82[EUR][1000 genomes]
rs9568834	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050969	chr13:53665927-54064861	Bivalent Enhancer Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:53820000-53821400	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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