The 2.0 version of rSNPBase

Variant report

Variant rs34461550
Chromosome Location chr1:161783913-161783914
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
2 chr1:161738600-161795600 Weak transcription Gastric stomach
3 chr1:161753400-161800600 Weak transcription Spleen Spleen
4 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
5 chr1:161757400-161797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:161762200-161790600 Weak transcription Fetal Brain Male brain
7 chr1:161762400-161790800 Weak transcription NH-A brain
8 chr1:161762400-161791200 Weak transcription Right Ventricle heart
9 chr1:161762400-161795400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:161762800-161797600 Weak transcription HMEC breast
11 chr1:161763000-161797400 Weak transcription NHLF lung
12 chr1:161766000-161790800 Weak transcription Lung lung
13 chr1:161767400-161791200 Weak transcription Aorta Aorta
14 chr1:161768000-161789400 Weak transcription HepG2 liver
15 chr1:161772200-161789400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:161772600-161785800 Weak transcription Hela-S3 cervix
17 chr1:161773000-161790600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:161773400-161789800 Weak transcription Brain Substantia Nigra brain
19 chr1:161773400-161790800 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:161773400-161797200 Weak transcription Muscle Satellite Cultured Cells --
21 chr1:161773400-161854400 Weak transcription Small Intestine intestine
22 chr1:161774600-161786000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr1:161775800-161794800 Weak transcription Fetal Stomach stomach
24 chr1:161776400-161787000 Weak transcription Fetal Heart heart
25 chr1:161776600-161785800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:161776800-161785800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:161776800-161789400 Weak transcription Placenta Placenta
28 chr1:161777600-161786000 Weak transcription Colon Smooth Muscle Colon
29 chr1:161780000-161789800 Weak transcription Ovary ovary
30 chr1:161780200-161784400 Strong transcription Primary T cells fromperipheralblood blood
31 chr1:161780200-161786000 Weak transcription Rectal Smooth Muscle rectum
32 chr1:161780200-161797200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:161780400-161785800 Strong transcription Liver Liver
34 chr1:161780400-161791200 Weak transcription Brain Angular Gyrus brain
35 chr1:161780400-161791200 Weak transcription Thymus Thymus
36 chr1:161780400-161795000 Weak transcription Esophagus oesophagus
37 chr1:161780400-161795000 Weak transcription Left Ventricle heart
38 chr1:161780400-161798800 Strong transcription Primary monocytes fromperipheralblood blood
39 chr1:161780400-161824400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:161780600-161786000 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:161780600-161789800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:161780600-161790800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:161780600-161790800 Weak transcription HSMM muscle
44 chr1:161780600-161791000 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:161780600-161791400 Weak transcription Brain Hippocampus Middle brain
46 chr1:161780600-161798800 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr1:161780600-161808200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:161780600-161823400 Weak transcription A549 lung
49 chr1:161780600-161836600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:161780800-161786000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015