The 2.0 version of rSNPBase

Variant report

Variant rs34312480
Chromosome Location chr1:161865763-161865764
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:161824400-161882000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:161836600-161868000 Weak transcription Fetal Kidney kidney
4 chr1:161836600-161888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:161854600-161871400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:161855200-161867400 Weak transcription NHEK skin
7 chr1:161855400-161879000 Weak transcription Hela-S3 cervix
8 chr1:161859200-161885400 Weak transcription Psoas Muscle Psoas
9 chr1:161859400-161867000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:161859400-161873600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:161859400-161882600 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:161859400-161882800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:161861200-161868800 Weak transcription HSMM muscle
14 chr1:161861200-161881200 Weak transcription Ovary ovary
15 chr1:161861400-161873400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:161861400-161874600 Weak transcription GM12878-XiMat blood
17 chr1:161861400-161879400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:161861400-161881200 Weak transcription Aorta Aorta
19 chr1:161861400-161881800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:161861400-161882000 Weak transcription Adipose Nuclei Adipose
21 chr1:161861400-161884000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:161861400-161884000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:161861400-161884400 Weak transcription Fetal Intestine Large intestine
24 chr1:161861600-161866600 Weak transcription Duodenum Mucosa Duodenum
25 chr1:161861600-161866800 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:161861600-161869000 Weak transcription Fetal Stomach stomach
27 chr1:161861600-161875000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:161861600-161876400 Weak transcription HSMMtube muscle
29 chr1:161861600-161876800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:161861600-161877200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:161861600-161879000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:161861600-161879000 Weak transcription Thymus Thymus
33 chr1:161861600-161880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:161861600-161881000 Weak transcription Primary B cells from cord blood blood
35 chr1:161861600-161882400 Weak transcription Placenta Placenta
36 chr1:161861600-161882400 Weak transcription Dnd41 blood
37 chr1:161861600-161883400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:161861600-161883800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:161861600-161884000 Weak transcription Fetal Muscle Leg muscle
40 chr1:161861600-161884000 Weak transcription Left Ventricle heart
41 chr1:161861600-161884000 Weak transcription Pancreas Pancrea
42 chr1:161861600-161884000 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr1:161861600-161891400 Weak transcription Rectal Smooth Muscle rectum
44 chr1:161861600-161906400 Weak transcription Stomach Smooth Muscle stomach
45 chr1:161861600-161936000 Weak transcription Fetal Intestine Small intestine
46 chr1:161861800-161866400 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr1:161861800-161881400 Weak transcription Primary B cells from peripheral blood blood
48 chr1:161861800-161882400 Weak transcription Liver Liver
49 chr1:161861800-161883800 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:161862000-161875000 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015