The 2.0 version of rSNPBase

Variant report

Variant rs71639910
Chromosome Location chr1:161937774-161937775
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161897800-161940000 Weak transcription Brain Germinal Matrix brain
2 chr1:161902800-161943400 Weak transcription Esophagus oesophagus
3 chr1:161904800-161956600 Weak transcription Fetal Brain Male brain
4 chr1:161911600-161939400 Weak transcription HepG2 liver
5 chr1:161912600-161941600 Weak transcription Fetal Kidney kidney
6 chr1:161926200-161939400 Weak transcription Fetal Heart heart
7 chr1:161926200-161942200 Weak transcription Right Ventricle heart
8 chr1:161927000-161944000 Weak transcription Colonic Mucosa Colon
9 chr1:161928200-161938000 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr1:161928200-161938800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr1:161928400-161941800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:161928600-161939000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:161929000-161943800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:161929200-161944000 Weak transcription Ovary ovary
15 chr1:161931000-161938400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:161931000-161939600 Weak transcription Fetal Brain Female brain
17 chr1:161931000-161943200 Weak transcription Placenta Placenta
18 chr1:161931200-161940400 Weak transcription Fetal Thymus thymus
19 chr1:161931200-161940600 Weak transcription Fetal Intestine Large intestine
20 chr1:161931200-161942400 Weak transcription Spleen Spleen
21 chr1:161931200-161943400 Weak transcription Psoas Muscle Psoas
22 chr1:161931400-161943400 Weak transcription K562 blood
23 chr1:161931800-161942800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:161932200-161939400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:161932400-161939200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:161932400-161939400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:161932400-161942200 Weak transcription Colon Smooth Muscle Colon
28 chr1:161932400-161955400 Weak transcription Brain Substantia Nigra brain
29 chr1:161932600-161938000 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr1:161932600-161938200 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr1:161932600-161939200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:161932600-161940200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr1:161932600-161940400 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr1:161932600-161940400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:161932600-161940400 Weak transcription Brain Anterior Caudate brain
36 chr1:161932600-161943200 Weak transcription Adipose Nuclei Adipose
37 chr1:161932600-161943200 Weak transcription Right Atrium heart
38 chr1:161932600-161943800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:161932800-161938200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:161932800-161940200 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr1:161932800-161943200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:161932800-161944000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:161933000-161938000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:161933000-161938600 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:161933000-161939000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:161933200-161939000 Weak transcription NHEK skin
47 chr1:161933200-161939400 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr1:161933200-161940400 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr1:161933400-161940400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:161933400-161941800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015