The 2.0 version of rSNPBase

Variant report

Variant rs35621393
Chromosome Location chr1:161808253-161808254
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161773400-161854400 Weak transcription Small Intestine intestine
2 chr1:161780400-161824400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:161780600-161823400 Weak transcription A549 lung
4 chr1:161780600-161836600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:161780800-161812400 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:161780800-161823000 Weak transcription HSMMtube muscle
7 chr1:161780800-161825800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:161780800-161834000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:161781000-161823000 Weak transcription Fetal Kidney kidney
10 chr1:161785400-161822400 Weak transcription Fetal Intestine Small intestine
11 chr1:161787600-161809800 Weak transcription Rectal Smooth Muscle rectum
12 chr1:161787600-161821000 Weak transcription Stomach Smooth Muscle stomach
13 chr1:161790200-161816000 Weak transcription NHEK skin
14 chr1:161791400-161823000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:161791600-161812800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:161791600-161816200 Weak transcription HepG2 liver
17 chr1:161791600-161823000 Weak transcription Fetal Lung lung
18 chr1:161791800-161819800 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:161791800-161820800 Weak transcription Brain Hippocampus Middle brain
20 chr1:161791800-161822400 Weak transcription Thymus Thymus
21 chr1:161791800-161823000 Weak transcription Fetal Brain Female brain
22 chr1:161791800-161823600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr1:161791800-161842000 Weak transcription Brain Angular Gyrus brain
24 chr1:161792000-161822400 Weak transcription Aorta Aorta
25 chr1:161792000-161823200 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:161792200-161816000 Weak transcription Brain Anterior Caudate brain
27 chr1:161792200-161816200 Weak transcription Duodenum Mucosa Duodenum
28 chr1:161792200-161816800 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:161792200-161821000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:161792200-161838000 Weak transcription Fetal Brain Male brain
31 chr1:161792600-161818600 Weak transcription Ovary ovary
32 chr1:161792800-161812600 Weak transcription HUVEC blood vessel
33 chr1:161792800-161816000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:161794200-161808400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:161794800-161811400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:161795200-161812800 Weak transcription Esophagus oesophagus
37 chr1:161795200-161860200 Weak transcription Lung lung
38 chr1:161795400-161822400 Weak transcription Fetal Stomach stomach
39 chr1:161795600-161809200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:161795600-161823000 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:161795800-161809400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr1:161795800-161812400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:161795800-161827600 Weak transcription Gastric stomach
44 chr1:161795800-161859000 Weak transcription Pancreas Pancrea
45 chr1:161796000-161820600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:161797800-161812800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:161797800-161818600 Weak transcription NHLF lung
48 chr1:161798200-161812800 Weak transcription Osteobl bone
49 chr1:161798200-161819800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:161798600-161809200 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015