Variant report
Variant | rs34536760 |
---|---|
Chromosome Location | chr14:72762701-72762702 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11846195 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11847074 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11847945 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11848731 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11851057 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17110207 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7141883 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7143754 | 0.88[AFR][1000 genomes] |
rs7143881 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7147174 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7151115 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7151667 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7152452 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73302877 | 0.96[AFR][1000 genomes] |
rs73302883 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73302890 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73302900 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73304904 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73304927 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73304934 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73304947 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs8007579 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv530794 | chr14:72113818-73034008 | Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 8 gene(s) | inside rSNPs | diseases |
2 | nsv948800 | chr14:72462557-73150701 | Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 11 gene(s) | inside rSNPs | diseases |
3 | nsv1041492 | chr14:72634606-72768970 | Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
4 | esv3388431 | chr14:72761049-72762997 | ZNF genes & repeats | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:72760400-72763400 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |