Variant report
| Variant | rs34567803 |
|---|---|
| Chromosome Location | chr10:26008677-26008678 |
| allele | -/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:29)
| rs_ID | r2[population] |
|---|---|
| rs11014622 | 1.00[ASN][1000 genomes] |
| rs11014623 | 1.00[ASN][1000 genomes] |
| rs11014625 | 1.00[ASN][1000 genomes] |
| rs12355530 | 1.00[ASN][1000 genomes] |
| rs12357174 | 1.00[ASN][1000 genomes] |
| rs1335197 | 1.00[ASN][1000 genomes] |
| rs17557337 | 1.00[ASN][1000 genomes] |
| rs17557638 | 1.00[ASN][1000 genomes] |
| rs17737176 | 1.00[ASN][1000 genomes] |
| rs17737261 | 1.00[ASN][1000 genomes] |
| rs4237372 | 1.00[ASN][1000 genomes] |
| rs4237374 | 1.00[ASN][1000 genomes] |
| rs4523593 | 1.00[ASN][1000 genomes] |
| rs4747532 | 1.00[ASN][1000 genomes] |
| rs4747533 | 1.00[ASN][1000 genomes] |
| rs4749050 | 1.00[ASN][1000 genomes] |
| rs55945306 | 1.00[ASN][1000 genomes] |
| rs56386940 | 1.00[ASN][1000 genomes] |
| rs58949541 | 1.00[ASN][1000 genomes] |
| rs59190298 | 1.00[ASN][1000 genomes] |
| rs61846881 | 1.00[ASN][1000 genomes] |
| rs6482497 | 1.00[ASN][1000 genomes] |
| rs6482498 | 1.00[ASN][1000 genomes] |
| rs7070879 | 1.00[ASN][1000 genomes] |
| rs7091731 | 1.00[ASN][1000 genomes] |
| rs7094086 | 1.00[ASN][1000 genomes] |
| rs7099100 | 1.00[ASN][1000 genomes] |
| rs722969 | 1.00[ASN][1000 genomes] |
| rs7921299 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3380301 | chr10:26005549-26011700 | Enhancers Weak transcription Active TSS | lncRNA | n/a | inside rSNPs | n/a |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:26005000-26009400 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 2 | chr10:26005400-26011800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
