Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:211782443..211790536-chr1:211800686..211806134,8	K562	blood:
2	chr1:211793145..211800078-chr1:211800841..211805263,11	K562	blood:
3	chr1:211741510..211743942-chr1:211802313..211805190,2	K562	blood:
4	chr1:211751888..211754442-chr1:211802354..211807016,4	K562	blood:
5	chr1:211723836..211726328-chr1:211802302..211805262,2	K562	blood:
6	chr1:211751862..211753388-chr1:211800934..211803854,2	K562	blood:

Variant related genes	Relation type
ENSG00000170385	Chromatin interaction

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11119776	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11119777	0.83[AMR][1000 genomes]
rs11119784	1.00[ASN][1000 genomes]
rs12086390	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12724388	0.85[ASN][1000 genomes]
rs12736496	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1470344	0.82[AMR][1000 genomes]
rs35507775	0.81[AMR][1000 genomes]
rs61851769	0.95[ASN][1000 genomes]
rs6540695	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6664930	0.85[ASN][1000 genomes]
rs6666442	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6673372	1.00[ASN][1000 genomes]
rs749964	0.85[ASN][1000 genomes]
rs7516924	0.95[ASN][1000 genomes]
rs7521959	0.85[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211790400-211803600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:211793400-211803000	Weak transcription	Fetal Intestine Small	intestine
3	chr1:211795200-211803400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr1:211796600-211803600	Weak transcription	Spleen	Spleen
5	chr1:211798600-211803800	Weak transcription	Hela-S3	cervix
6	chr1:211800000-211802600	Enhancers	Fetal Muscle Leg	muscle
7	chr1:211800000-211807200	Enhancers	Fetal Heart	heart
8	chr1:211800200-211802600	Enhancers	Fetal Muscle Trunk	muscle
9	chr1:211800800-211802600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr1:211800800-211803600	Weak transcription	Left Ventricle	heart
11	chr1:211801200-211802600	Enhancers	HSMMtube	muscle
12	chr1:211801400-211802600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr1:211801800-211802600	Enhancers	Brain Germinal Matrix	brain
14	chr1:211801800-211802600	Bivalent Enhancer	HSMM	muscle
15	chr1:211802000-211803400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr1:211802000-211803400	Enhancers	K562	blood
17	chr1:211802000-211803600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr1:211802000-211806400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr1:211802400-211802600	Enhancers	Right Atrium	heart
20	chr1:211802400-211803400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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