Variant report

Variant	rs7521959
Chromosome Location	chr1:211799331-211799332
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11119784	0.85[ASN][1000 genomes]
rs12724388	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12736496	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12751701	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1470344	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1470345	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34603396	0.85[ASN][1000 genomes]
rs35507775	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61851765	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6540693	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6540694	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6540695	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6664930	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6666442	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6673372	0.85[ASN][1000 genomes]
rs749964	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7516924	0.81[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211790400-211803600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:211793400-211803000	Weak transcription	Fetal Intestine Small	intestine
3	chr1:211795200-211800000	Weak transcription	Left Ventricle	heart
4	chr1:211795200-211802400	Weak transcription	Right Atrium	heart
5	chr1:211795200-211803400	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr1:211795400-211800200	Weak transcription	Fetal Muscle Trunk	muscle
7	chr1:211796600-211803600	Weak transcription	Spleen	Spleen
8	chr1:211797000-211800000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:211797200-211800400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr1:211798600-211800200	Weak transcription	K562	blood
11	chr1:211798600-211801200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr1:211798600-211803800	Weak transcription	Hela-S3	cervix
13	chr1:211798800-211801800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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