Variant report
| Variant | rs6540693 |
|---|---|
| Chromosome Location | chr1:211790579-211790580 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:211781800-211792000 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr1:211785600-211794800 | Weak transcription | Brain Anterior Caudate | brain |
| 3 | chr1:211787000-211796800 | Weak transcription | Gastric | stomach |
| 4 | chr1:211787400-211793400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr1:211788200-211794600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 6 | chr1:211788400-211791800 | Enhancers | K562 | blood |
| 7 | chr1:211788400-211793400 | Weak transcription | Spleen | Spleen |
| 8 | chr1:211788600-211792200 | Weak transcription | Fetal Intestine Large | intestine |
| 9 | chr1:211788800-211792600 | Enhancers | HepG2 | liver |
| 10 | chr1:211789000-211792200 | Weak transcription | Fetal Intestine Small | intestine |
| 11 | chr1:211789200-211792600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 12 | chr1:211789400-211790600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr1:211789400-211790600 | Enhancers | Adipose Nuclei | Adipose |
| 14 | chr1:211789400-211790800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 15 | chr1:211789400-211790800 | Enhancers | Fetal Muscle Trunk | muscle |
| 16 | chr1:211789600-211790600 | Enhancers | Fetal Muscle Leg | muscle |
| 17 | chr1:211789600-211790800 | Enhancers | Left Ventricle | heart |
| 18 | chr1:211789800-211790600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 19 | chr1:211790200-211790600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr1:211790200-211790600 | Bivalent Enhancer | Fetal Stomach | stomach |
| 21 | chr1:211790200-211794800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 22 | chr1:211790200-211794800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 23 | chr1:211790400-211790600 | Enhancers | Colonic Mucosa | Colon |
| 24 | chr1:211790400-211792200 | Weak transcription | Liver | Liver |
| 25 | chr1:211790400-211794400 | Weak transcription | Esophagus | oesophagus |
| 26 | chr1:211790400-211794600 | Weak transcription | Right Atrium | heart |
| 27 | chr1:211790400-211794800 | Weak transcription | Right Ventricle | heart |
| 28 | chr1:211790400-211795200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 29 | chr1:211790400-211796600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 30 | chr1:211790400-211798400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr1:211790400-211803600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
