Variant report

Variant	rs1470344
Chromosome Location	chr1:211795252-211795253
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:211777656..211789537-chr1:211792028..211798981,15	K562	blood:
2	chr1:211789684..211791521-chr1:211794844..211797087,2	K562	blood:
3	chr1:211793145..211800078-chr1:211800841..211805263,11	K562	blood:
4	chr1:211789857..211792626-chr1:211793343..211797405,3	MCF-7	breast:
5	chr1:211794683..211796296-chr1:211806280..211809015,2	MCF-7	breast:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12724388	0.87[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12736496	0.96[CEU][hapmap];1.00[JPT][hapmap];0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12751701	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1470345	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2027226	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2184844	1.00[JPT][hapmap]
rs34603396	0.82[AMR][1000 genomes]
rs35507775	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4951537	0.86[CEU][hapmap]
rs61851765	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61851769	0.84[ASN][1000 genomes]
rs6540693	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6540694	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6540695	0.87[CEU][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6659316	1.00[JPT][hapmap]
rs6663436	1.00[CHB][hapmap]
rs6664930	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6666442	0.88[CEU][hapmap];1.00[JPT][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6673372	1.00[JPT][hapmap]
rs749964	0.88[CEU][hapmap];1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7511687	1.00[JPT][hapmap]
rs7516189	1.00[JPT][hapmap]
rs7521959	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7539988	1.00[JPT][hapmap]
rs7554588	1.00[JPT][hapmap]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211787000-211796800	Weak transcription	Gastric	stomach
2	chr1:211790400-211796600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:211790400-211798400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr1:211790400-211803600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr1:211793400-211795400	Enhancers	HepG2	liver
6	chr1:211793400-211796800	Weak transcription	Fetal Intestine Large	intestine
7	chr1:211793400-211803000	Weak transcription	Fetal Intestine Small	intestine
8	chr1:211794200-211796400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr1:211794400-211795400	Enhancers	Fetal Muscle Trunk	muscle
10	chr1:211794600-211795400	Enhancers	Stomach Smooth Muscle	stomach
11	chr1:211794600-211795400	Enhancers	A549	lung
12	chr1:211795000-211795400	Enhancers	Spleen	Spleen
13	chr1:211795000-211795600	Enhancers	Adipose Nuclei	Adipose
14	chr1:211795200-211796400	Weak transcription	K562	blood
15	chr1:211795200-211798200	Weak transcription	Hela-S3	cervix
16	chr1:211795200-211800000	Weak transcription	Left Ventricle	heart
17	chr1:211795200-211802400	Weak transcription	Right Atrium	heart
18	chr1:211795200-211803400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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