Variant report
| Variant | rs34884539 |
|---|---|
| Chromosome Location | chr7:117314717-117314718 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:117306200-117315600 | Weak transcription | Fetal Lung | lung |
| 2 | chr7:117312400-117317200 | Enhancers | Fetal Intestine Large | intestine |
| 3 | chr7:117312800-117314800 | Enhancers | Liver | Liver |
| 4 | chr7:117312800-117317400 | Enhancers | Fetal Intestine Small | intestine |
| 5 | chr7:117313000-117316400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 6 | chr7:117313200-117315400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 7 | chr7:117313200-117316600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr7:117313200-117317000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 9 | chr7:117313400-117315000 | Enhancers | Stomach Mucosa | stomach |
| 10 | chr7:117313400-117315000 | Enhancers | Dnd41 | blood |
| 11 | chr7:117313600-117315400 | Weak transcription | NHLF | lung |
| 12 | chr7:117313600-117315800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 13 | chr7:117313800-117315600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 14 | chr7:117313800-117315800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 15 | chr7:117313800-117316000 | Weak transcription | Pancreas | Pancrea |
| 16 | chr7:117313800-117316200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr7:117313800-117316200 | Weak transcription | Right Atrium | heart |
| 18 | chr7:117314000-117314800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 19 | chr7:117314000-117315000 | Enhancers | Brain Cingulate Gyrus | brain |
| 20 | chr7:117314000-117315000 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 21 | chr7:117314000-117315000 | Enhancers | Brain Substantia Nigra | brain |
| 22 | chr7:117314000-117315400 | Weak transcription | Hela-S3 | cervix |
| 23 | chr7:117314000-117315600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr7:117314000-117315600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 25 | chr7:117314000-117315600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr7:117314000-117315800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 27 | chr7:117314000-117315800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr7:117314000-117315800 | Weak transcription | Adipose Nuclei | Adipose |
| 29 | chr7:117314000-117315800 | Weak transcription | Colonic Mucosa | Colon |
| 30 | chr7:117314000-117316000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 31 | chr7:117314000-117316000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 32 | chr7:117314000-117316400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 33 | chr7:117314000-117317200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 34 | chr7:117314200-117315000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 35 | chr7:117314200-117315000 | Enhancers | Brain Hippocampus Middle | brain |
| 36 | chr7:117314200-117315000 | Weak transcription | A549 | lung |
| 37 | chr7:117314200-117317400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 38 | chr7:117314400-117314800 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 39 | chr7:117314400-117314800 | Enhancers | Brain Anterior Caudate | brain |
| 40 | chr7:117314400-117315000 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 41 | chr7:117314400-117315000 | Enhancers | Fetal Thymus | thymus |
| 42 | chr7:117314400-117315600 | Weak transcription | Brain Angular Gyrus | brain |
| 43 | chr7:117314400-117315800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 44 | chr7:117314600-117314800 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
| 45 | chr7:117314600-117314800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr7:117314600-117315000 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 47 | chr7:117314600-117315000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 48 | chr7:117314600-117315200 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 49 | chr7:117314600-117316200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
