Variant report

Variant	rs35131082
Chromosome Location	chr7:117285534-117285535
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs34158598	1.00[AMR][1000 genomes]
rs34320215	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34369856	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34433037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34700268	1.00[AMR][1000 genomes]
rs34884539	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34892929	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34954896	1.00[AMR][1000 genomes]
rs34968508	1.00[AMR][1000 genomes]
rs35029552	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35167886	1.00[AMR][1000 genomes]
rs35238611	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35239381	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35647432	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35994051	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6942892	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6966254	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6972747	1.00[AMR][1000 genomes]
rs6977231	1.00[AMR][1000 genomes]
rs6977295	1.00[AMR][1000 genomes]
rs7778541	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7811545	1.00[AMR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117245200-117294000	Weak transcription	Pancreas	Pancrea
2	chr7:117258200-117286600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr7:117270800-117285600	Weak transcription	Stomach Mucosa	stomach
4	chr7:117271600-117285600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr7:117271800-117285600	Weak transcription	Fetal Intestine Large	intestine
6	chr7:117272600-117286600	Weak transcription	Fetal Intestine Small	intestine
7	chr7:117274600-117287400	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr7:117282600-117286600	Weak transcription	Duodenum Mucosa	Duodenum
9	chr7:117283400-117286800	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr7:117284600-117285800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr7:117284800-117286600	Enhancers	HUVEC	blood vessel
12	chr7:117284800-117286800	Enhancers	A549	lung
13	chr7:117285000-117286600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr7:117285000-117286800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr7:117285400-117285800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr7:117285400-117286000	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr7:117285400-117286000	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr7:117285400-117286000	Enhancers	NH-A	brain
19	chr7:117285400-117286200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr7:117285400-117286200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr7:117285400-117286200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr7:117285400-117286800	Enhancers	Hela-S3	cervix
23	chr7:117285400-117286800	Enhancers	HMEC	breast
24	chr7:117285400-117286800	Enhancers	NHEK	skin

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