Variant report

Variant	rs6966254
Chromosome Location	chr7:117288308-117288309
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs34158598	1.00[AMR][1000 genomes]
rs34320215	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34369856	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34433037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34700268	1.00[AMR][1000 genomes]
rs34884539	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34892929	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34954896	1.00[AMR][1000 genomes]
rs34968508	1.00[AMR][1000 genomes]
rs35029552	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35131082	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35167886	1.00[AMR][1000 genomes]
rs35238611	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35239381	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35647432	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35994051	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6942892	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6972747	1.00[AMR][1000 genomes]
rs6977231	1.00[AMR][1000 genomes]
rs6977295	1.00[AMR][1000 genomes]
rs7778541	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7811545	1.00[AMR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117245200-117294000	Weak transcription	Pancreas	Pancrea
2	chr7:117286000-117310200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:117286600-117289000	Strong transcription	Duodenum Mucosa	Duodenum
4	chr7:117286600-117289400	Strong transcription	Rectal Mucosa Donor 31	rectum
5	chr7:117286800-117293000	Weak transcription	Fetal Intestine Large	intestine
6	chr7:117286800-117294600	Weak transcription	Hela-S3	cervix
7	chr7:117287400-117288800	Strong transcription	Sigmoid Colon	Sigmoid Colon
8	chr7:117287600-117293000	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr7:117288000-117293200	Weak transcription	Fetal Intestine Small	intestine
10	chr7:117288200-117289000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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