Variant report

Variant	rs35994051
Chromosome Location	chr7:117324585-117324586
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:117314737..117317346-chr7:117324406..117328585,3	MCF-7	breast:
2	chr7:117314542..117317864-chr7:117323534..117325952,3	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs34158598	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34320215	1.00[AMR][1000 genomes]
rs34369856	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34433037	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34700268	1.00[AMR][1000 genomes]
rs34884539	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34892929	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34954896	1.00[AMR][1000 genomes]
rs34968508	1.00[AMR][1000 genomes]
rs35029552	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35131082	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35167886	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35238611	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35239381	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35647432	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6942892	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6966254	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6972747	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6977231	1.00[AMR][1000 genomes]
rs6977295	1.00[AMR][1000 genomes]
rs7778541	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7811545	1.00[AMR][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117315000-117326000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr7:117317200-117326000	Weak transcription	Dnd41	blood
3	chr7:117322000-117324800	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr7:117322000-117330600	Enhancers	Fetal Intestine Large	intestine
5	chr7:117322400-117324800	Enhancers	Fetal Intestine Small	intestine
6	chr7:117322800-117324600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:117323000-117324800	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr7:117323400-117324600	Enhancers	Colonic Mucosa	Colon
9	chr7:117323600-117326200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr7:117323800-117325000	Enhancers	Hela-S3	cervix
11	chr7:117323800-117326000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr7:117324000-117324600	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr7:117324000-117326000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr7:117324000-117326000	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr7:117324000-117328400	Weak transcription	Duodenum Mucosa	Duodenum
16	chr7:117324000-117328400	Weak transcription	Small Intestine	intestine
17	chr7:117324200-117326200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr7:117324200-117326400	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr7:117324200-117326600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr7:117324400-117326600	Weak transcription	Rectal Mucosa Donor 29	rectum

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