The 2.0 version of rSNPBase

Variant report

Variant rs35109193
Chromosome Location chr13:30981771-30981772
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30970000-30982200 Weak transcription Esophagus oesophagus
2 chr13:30970200-30982200 Weak transcription Psoas Muscle Psoas
3 chr13:30970600-30982200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr13:30970800-30982000 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr13:30973400-30982200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr13:30976400-30982200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr13:30976400-30982800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr13:30978000-30982200 Weak transcription K562 blood
9 chr13:30978200-30982000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr13:30979000-30982200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr13:30979000-30982200 Weak transcription HMEC breast
12 chr13:30979000-30983000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr13:30979400-30982200 Enhancers Fetal Thymus thymus
14 chr13:30979400-30982800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr13:30980000-30982200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr13:30980000-30982200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr13:30980200-30982200 Weak transcription Brain Germinal Matrix brain
18 chr13:30980200-30982200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr13:30980200-30982200 Weak transcription Fetal Kidney kidney
20 chr13:30980400-30982200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr13:30980400-30982200 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr13:30980400-30982200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:30980400-30982200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr13:30980400-30982200 Weak transcription Liver Liver
25 chr13:30980400-30982200 Weak transcription Stomach Smooth Muscle stomach
26 chr13:30980400-30982200 Weak transcription NHEK skin
27 chr13:30980600-30982200 Weak transcription Right Atrium heart
28 chr13:30981000-30982200 Enhancers Primary B cells from peripheral blood blood
29 chr13:30981000-30982200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr13:30981000-30982400 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr13:30981200-30982200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr13:30981200-30982200 Weak transcription Fetal Intestine Small intestine
33 chr13:30981400-30982200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr13:30981400-30982200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr13:30981400-30982200 Enhancers Primary T helper cells fromperipheralblood blood
36 chr13:30981400-30982200 Enhancers Thymus Thymus
37 chr13:30981400-30983200 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr13:30981400-30983600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr13:30981600-30982000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr13:30981600-30982200 Enhancers Primary B cells from cord blood blood
41 chr13:30981600-30982200 Enhancers Adipose Nuclei Adipose
42 chr13:30981600-30984000 Enhancers Primary T cells from cord blood blood

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Last update: Aug 31, 2015