Variant report

Variant	rs35207322
Chromosome Location	chr7:112148352-112148353
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10236486	0.94[AMR][1000 genomes]
rs12665935	0.85[AMR][1000 genomes]
rs12666832	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13232491	0.85[AMR][1000 genomes]
rs13232911	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17159738	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2190589	0.82[ASN][1000 genomes]
rs2396550	0.94[AMR][1000 genomes]
rs2906789	0.96[ASN][1000 genomes]
rs2906792	0.88[ASN][1000 genomes]
rs2906793	0.89[ASN][1000 genomes]
rs3095030	0.94[AMR][1000 genomes]
rs3095031	0.94[AMR][1000 genomes]
rs3095033	0.94[AMR][1000 genomes]
rs3095034	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3128377	0.94[AMR][1000 genomes]
rs3128378	0.94[AMR][1000 genomes]
rs34669443	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35066127	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112144200-112148800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr7:112144400-112150000	Weak transcription	Right Ventricle	heart
3	chr7:112146000-112149000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr7:112146000-112150000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr7:112146200-112149200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr7:112146400-112150400	Weak transcription	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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