Variant report
Variant | rs35791244 |
---|---|
Chromosome Location | chr1:94617835-94617836 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10443184 | 0.83[AFR][1000 genomes];0.91[EUR][1000 genomes] |
rs1048866 | 0.89[AFR][1000 genomes];0.93[EUR][1000 genomes] |
rs10782980 | 0.87[EUR][1000 genomes] |
rs10874840 | 0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs11165090 | 0.88[AFR][1000 genomes];0.93[EUR][1000 genomes] |
rs11196 | 0.92[AFR][1000 genomes];0.93[EUR][1000 genomes] |
rs1411698 | 0.91[EUR][1000 genomes] |
rs1411700 | 0.88[AFR][1000 genomes];0.93[EUR][1000 genomes] |
rs1411701 | 0.89[AFR][1000 genomes];0.93[EUR][1000 genomes] |
rs1541098 | 0.92[ASN][1000 genomes] |
rs1929130 | 0.85[AFR][1000 genomes];0.92[EUR][1000 genomes] |
rs3789687 | 0.88[EUR][1000 genomes] |
rs3814020 | 0.86[EUR][1000 genomes] |
rs6541340 | 0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6541411 | 0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6541412 | 0.81[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs6674226 | 0.90[AFR][1000 genomes];0.90[EUR][1000 genomes] |
rs6691702 | 0.93[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs7536759 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv871416 | chr1:94566311-94635028 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | nsv871210 | chr1:94579426-94629643 | Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:94608400-94632400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |