The 2.0 version of rSNPBase

Variant report

Variant rs35974904
Chromosome Location chr4:78097669-78097670
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78084600-78097800 Weak transcription Esophagus oesophagus
2 chr4:78084600-78102200 Weak transcription Spleen Spleen
3 chr4:78087400-78100600 Weak transcription Hela-S3 cervix
4 chr4:78089400-78108000 Weak transcription Left Ventricle heart
5 chr4:78090400-78109800 Weak transcription Gastric stomach
6 chr4:78090800-78098000 Weak transcription Fetal Brain Male brain
7 chr4:78091600-78098000 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr4:78091800-78105000 Weak transcription Adipose Nuclei Adipose
9 chr4:78092000-78097800 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr4:78092000-78099000 Enhancers HMEC breast
11 chr4:78092200-78097800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr4:78092200-78099200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr4:78092200-78106000 Weak transcription Primary T cells from cord blood blood
14 chr4:78092400-78097800 Weak transcription Fetal Lung lung
15 chr4:78092400-78097800 Weak transcription Placenta Placenta
16 chr4:78092400-78098200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr4:78092400-78098400 Weak transcription Fetal Kidney kidney
18 chr4:78092400-78100200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr4:78092400-78100400 Weak transcription Duodenum Mucosa Duodenum
20 chr4:78092400-78100800 Weak transcription Primary monocytes fromperipheralblood blood
21 chr4:78092600-78097800 Weak transcription Fetal Muscle Trunk muscle
22 chr4:78092600-78100800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr4:78092600-78108600 Weak transcription Thymus Thymus
24 chr4:78093000-78098000 Enhancers HSMM muscle
25 chr4:78094400-78114200 Weak transcription Primary B cells from cord blood blood
26 chr4:78095400-78101200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr4:78095800-78097800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr4:78096200-78100200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:78096400-78099400 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
30 chr4:78096400-78100000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr4:78096400-78100200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr4:78096800-78098200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr4:78096800-78098200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr4:78096800-78098600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr4:78096800-78108200 Weak transcription Fetal Brain Female brain
36 chr4:78097400-78101200 Enhancers Fetal Muscle Leg muscle
37 chr4:78097600-78098000 Bivalent Enhancer Muscle Satellite Cultured Cells --
38 chr4:78097600-78098200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr4:78097600-78098600 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
40 chr4:78097600-78098600 Enhancers Placenta Amnion Placenta Amnion
41 chr4:78097600-78098600 Flanking Active TSS NHEK skin
42 chr4:78097600-78098800 Enhancers Fetal Intestine Large intestine
43 chr4:78097600-78098800 Enhancers Fetal Intestine Small intestine
44 chr4:78097600-78099000 Enhancers Brain Germinal Matrix brain
45 chr4:78097600-78099400 Enhancers Fetal Stomach stomach
46 chr4:78097600-78101000 Enhancers HSMMtube muscle

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Last update: Aug 31, 2015