Variant report

Variant	rs35987086
Chromosome Location	chr4:20422390-20422391
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:20410769..20413206-chr4:20420351..20422540,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10008461	0.85[ASN][1000 genomes]
rs10015975	0.84[ASN][1000 genomes]
rs13134750	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1995982	0.83[ASN][1000 genomes]
rs35443168	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35642460	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4406013	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61789394	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6447961	0.85[ASN][1000 genomes]
rs6849536	0.85[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20414400-20422400	Weak transcription	Fetal Stomach	stomach
2	chr4:20420800-20422800	Enhancers	Colon Smooth Muscle	Colon
3	chr4:20420800-20423400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr4:20420800-20424800	Enhancers	NHDF-Ad	bronchial
5	chr4:20420800-20427600	Weak transcription	Brain Hippocampus Middle	brain
6	chr4:20420800-20433400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr4:20421000-20422400	Enhancers	Brain Substantia Nigra	brain
8	chr4:20421000-20433600	Weak transcription	Aorta	Aorta
9	chr4:20421200-20422400	Weak transcription	Brain Angular Gyrus	brain
10	chr4:20421200-20422600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:20421200-20424000	Enhancers	Fetal Lung	lung
12	chr4:20421200-20424400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr4:20421200-20424400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr4:20421200-20425000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr4:20421200-20430400	Weak transcription	NHLF	lung
16	chr4:20421200-20431800	Weak transcription	Rectal Smooth Muscle	rectum
17	chr4:20421400-20424200	Weak transcription	Osteobl	bone
18	chr4:20421400-20424800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr4:20421400-20433400	Weak transcription	Brain Anterior Caudate	brain
20	chr4:20422200-20423000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr4:20422200-20423600	Enhancers	Muscle Satellite Cultured Cells	--

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