Variant report

Variant	rs36052366
Chromosome Location	chr17:46354179-46354180
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:46345603..46350515-chr17:46350981..46354335,5	K562	blood:
2	chr17:46352584..46354190-chr17:46697085..46699323,2	K562	blood:
3	chr17:46351276..46354190-chr17:46697085..46699771,3	K562	blood:

rs_ID	r²[population]
rs12938165	0.87[AFR][1000 genomes]
rs12941129	0.93[AFR][1000 genomes]
rs12941208	0.87[AFR][1000 genomes]
rs12941352	0.86[AFR][1000 genomes]
rs12946679	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12947993	0.93[AFR][1000 genomes]
rs12948331	0.89[AFR][1000 genomes]
rs12948470	0.87[AFR][1000 genomes]
rs12950437	0.96[AFR][1000 genomes]
rs34018531	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34042333	0.87[AFR][1000 genomes]
rs34171724	0.94[AFR][1000 genomes]
rs34206844	0.89[AFR][1000 genomes]
rs34212996	0.83[AFR][1000 genomes]
rs34238294	0.87[AFR][1000 genomes]
rs34287661	0.89[AFR][1000 genomes]
rs34312987	0.87[AFR][1000 genomes]
rs34488822	0.90[AFR][1000 genomes]
rs34583963	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34641642	0.93[AFR][1000 genomes]
rs34736152	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34938374	0.93[AFR][1000 genomes]
rs34981051	0.93[AFR][1000 genomes]
rs35048726	0.93[AFR][1000 genomes]
rs35323848	0.82[AFR][1000 genomes]
rs35403206	0.93[AFR][1000 genomes]
rs35441072	0.93[AFR][1000 genomes]
rs35457430	0.87[AFR][1000 genomes]
rs35460744	0.89[AFR][1000 genomes]
rs35513747	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35532660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35625427	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55657194	0.87[AFR][1000 genomes]
rs56310092	0.93[AFR][1000 genomes]
rs60597994	0.82[AFR][1000 genomes]
rs71377353	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs71377358	0.93[AFR][1000 genomes]
rs71377364	0.87[AFR][1000 genomes]
rs8080031	0.94[AFR][1000 genomes]

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46319600-46372000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:46322800-46356200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr17:46323000-46370800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr17:46324200-46355800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr17:46324200-46371600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr17:46326200-46361200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr17:46343400-46355800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr17:46343400-46371200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr17:46343600-46356000	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr17:46344600-46356000	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr17:46353000-46356000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr17:46353200-46355800	Weak transcription	Primary T cells fromperipheralblood	blood
13	chr17:46353400-46354200	Weak transcription	Primary T cells from cord blood	blood
14	chr17:46353400-46355800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
15	chr17:46353800-46354400	Enhancers	HSMMtube	muscle
16	chr17:46353800-46354800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
17	chr17:46354000-46354400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr17:46354000-46354400	Bivalent Enhancer	HSMM	muscle
19	chr17:46354000-46354400	Enhancers	HUVEC	blood vessel

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