Variant report

Variant	rs34171724
Chromosome Location	chr17:46341993-46341994
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:46331179..46335442-chr17:46341781..46344659,3	K562	blood:
2	chr17:46340828..46342560-chr17:46696825..46698814,3	K562	blood:
3	chr17:46340880..46343379-chr17:46515799..46517839,2	K562	blood:
4	chr17:46340828..46343787-chr17:46696825..46699589,2	K562	blood:

rs_ID	r²[population]
rs1022087	1.00[AMR][1000 genomes]
rs12938165	0.82[AFR][1000 genomes]
rs12941129	0.87[AFR][1000 genomes]
rs12941208	0.82[AFR][1000 genomes]
rs12941352	0.81[AFR][1000 genomes]
rs12946679	0.94[AFR][1000 genomes]
rs12947993	0.87[AFR][1000 genomes]
rs12948331	0.84[AFR][1000 genomes]
rs12948470	0.82[AFR][1000 genomes]
rs12950437	0.91[AFR][1000 genomes]
rs34018531	0.91[AFR][1000 genomes]
rs34042333	0.82[AFR][1000 genomes]
rs34206844	0.84[AFR][1000 genomes]
rs34212996	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34238294	0.82[AFR][1000 genomes]
rs34287661	0.84[AFR][1000 genomes]
rs34312987	0.82[AFR][1000 genomes]
rs34488822	0.85[AFR][1000 genomes]
rs34583963	0.91[AFR][1000 genomes]
rs34641642	0.87[AFR][1000 genomes]
rs34736152	0.91[AFR][1000 genomes]
rs34938374	0.87[AFR][1000 genomes]
rs34981051	0.87[AFR][1000 genomes]
rs35048726	0.87[AFR][1000 genomes]
rs35323848	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35403206	0.87[AFR][1000 genomes]
rs35441072	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35457430	0.82[AFR][1000 genomes]
rs35460744	0.84[AFR][1000 genomes]
rs35513747	0.94[AFR][1000 genomes]
rs35532660	0.94[AFR][1000 genomes]
rs35588100	1.00[AMR][1000 genomes]
rs35625427	0.91[AFR][1000 genomes]
rs36052366	0.94[AFR][1000 genomes]
rs55657194	0.82[AFR][1000 genomes]
rs56310092	0.87[AFR][1000 genomes]
rs60597994	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs71377353	0.94[AFR][1000 genomes]
rs71377358	0.87[AFR][1000 genomes]
rs71377360	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs71377364	0.82[AFR][1000 genomes]
rs8080031	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46319600-46372000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:46322600-46342200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr17:46322800-46356200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr17:46323000-46370800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr17:46324200-46355800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr17:46324200-46371600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr17:46324800-46343000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr17:46326200-46361200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
9	chr17:46336200-46342400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr17:46337000-46343000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr17:46338000-46342400	Weak transcription	Duodenum Mucosa	Duodenum
12	chr17:46338800-46342200	Weak transcription	Fetal Intestine Large	intestine
13	chr17:46339000-46343000	Weak transcription	K562	blood
14	chr17:46339200-46343400	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr17:46339400-46342800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr17:46339400-46343600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr17:46339600-46343000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr17:46339600-46343800	Enhancers	NHDF-Ad	bronchial
19	chr17:46339800-46343200	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr17:46339800-46352200	Weak transcription	Primary T cells from cord blood	blood
21	chr17:46340200-46342200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr17:46341000-46342200	Enhancers	Fetal Lung	lung
23	chr17:46341000-46343400	Enhancers	HUVEC	blood vessel
24	chr17:46341400-46342400	Weak transcription	Primary T cells fromperipheralblood	blood
25	chr17:46341400-46343400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr17:46341600-46343000	Weak transcription	Fetal Kidney	kidney
27	chr17:46341800-46343000	Enhancers	HSMM	muscle
28	chr17:46341800-46343200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr17:46341800-46343400	Enhancers	Rectal Mucosa Donor 31	rectum
30	chr17:46341800-46343400	Flanking Active TSS	A549	lung
31	chr17:46341800-46343600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr17:46341800-46343600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr17:46341800-46343800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
34	chr17:46341800-46344400	Enhancers	Fetal Intestine Small	intestine
35	chr17:46341800-46344600	Enhancers	Primary T helper cells PMA-I stimulated	--

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