Variant report

Variant	rs34018531
Chromosome Location	chr17:46387234-46387235
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:46374830..46377462-chr17:46386139..46388346,2	K562	blood:
2	chr17:46386965..46388989-chr17:46394978..46396866,2	K562	blood:
3	chr17:46385370..46387409-chr17:46687865..46690855,2	K562	blood:
4	chr17:46385991..46388677-chr17:46406157..46408894,2	K562	blood:

Variant related genes	Relation type
ENSG00000120068	Chromatin interaction
ENSG00000260027	Chromatin interaction

rs_ID	r²[population]
rs12938165	0.91[AFR][1000 genomes]
rs12941129	0.96[AFR][1000 genomes]
rs12941208	0.91[AFR][1000 genomes]
rs12941352	0.89[AFR][1000 genomes]
rs12946679	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12947993	0.96[AFR][1000 genomes]
rs12948331	0.93[AFR][1000 genomes]
rs12948470	0.91[AFR][1000 genomes]
rs12950437	1.00[AFR][1000 genomes]
rs34042333	0.91[AFR][1000 genomes]
rs34171724	0.91[AFR][1000 genomes]
rs34206844	0.93[AFR][1000 genomes]
rs34238294	0.91[AFR][1000 genomes]
rs34287661	0.93[AFR][1000 genomes]
rs34312987	0.91[AFR][1000 genomes]
rs34367404	0.82[AFR][1000 genomes]
rs34488822	0.93[AFR][1000 genomes]
rs34583963	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34641642	0.96[AFR][1000 genomes]
rs34736152	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34938374	0.96[AFR][1000 genomes]
rs34981051	0.96[AFR][1000 genomes]
rs35048726	0.96[AFR][1000 genomes]
rs35323848	0.86[AFR][1000 genomes]
rs35403206	0.96[AFR][1000 genomes]
rs35441072	0.89[AFR][1000 genomes]
rs35457430	0.91[AFR][1000 genomes]
rs35460744	0.93[AFR][1000 genomes]
rs35513747	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35532660	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35625427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs36052366	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55657194	0.91[AFR][1000 genomes]
rs56310092	0.96[AFR][1000 genomes]
rs60597994	0.86[AFR][1000 genomes]
rs71377353	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs71377358	0.96[AFR][1000 genomes]
rs71377360	0.80[AFR][1000 genomes]
rs71377364	0.91[AFR][1000 genomes]
rs8080031	0.91[AFR][1000 genomes]

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46373200-46415000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:46373600-46388400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr17:46375800-46396400	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr17:46375800-46415800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr17:46377200-46421000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr17:46378800-46389800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr17:46380200-46395400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr17:46382000-46390200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr17:46383200-46388800	Weak transcription	Primary T cells from cord blood	blood
10	chr17:46384800-46387600	Weak transcription	K562	blood
11	chr17:46385000-46390000	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr17:46385200-46387800	Enhancers	GM12878-XiMat	blood
13	chr17:46385400-46393400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr17:46385800-46389400	Weak transcription	A549	lung
15	chr17:46386200-46388200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr17:46386200-46390200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr17:46386200-46407800	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr17:46387000-46388200	Enhancers	Fetal Kidney	kidney
19	chr17:46387200-46387400	Bivalent Enhancer	Primary B cells from cord blood	blood
20	chr17:46387200-46387600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood

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