The 2.0 version of rSNPBase

Variant report

Variant rs36097346
Chromosome Location chr15:52077729-52077730
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52052200-52101800 Weak transcription Colonic Mucosa Colon
2 chr15:52052400-52078400 Weak transcription Rectal Smooth Muscle rectum
3 chr15:52052600-52106600 Weak transcription HSMM muscle
4 chr15:52053400-52090600 Weak transcription Pancreas Pancrea
5 chr15:52060200-52103400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:52060400-52079200 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr15:52060400-52085400 Weak transcription Fetal Lung lung
8 chr15:52060600-52087400 Weak transcription Gastric stomach
9 chr15:52060600-52088400 Weak transcription Duodenum Mucosa Duodenum
10 chr15:52060600-52091000 Weak transcription Right Ventricle heart
11 chr15:52060800-52101200 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr15:52060800-52102600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr15:52060800-52105400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr15:52061600-52085400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr15:52061600-52112000 Weak transcription NHLF lung
16 chr15:52061800-52098600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr15:52064400-52090400 Weak transcription Left Ventricle heart
18 chr15:52064600-52078400 Weak transcription Fetal Muscle Leg muscle
19 chr15:52065600-52090600 Weak transcription Spleen Spleen
20 chr15:52065800-52091000 Weak transcription Esophagus oesophagus
21 chr15:52067200-52090600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr15:52067400-52078400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr15:52067400-52079800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr15:52067600-52090600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr15:52067800-52089000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr15:52068400-52078200 Weak transcription Thymus Thymus
27 chr15:52068400-52079200 Weak transcription Fetal Stomach stomach
28 chr15:52069200-52078400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr15:52069200-52091000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr15:52069400-52078800 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr15:52069400-52085200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr15:52071000-52080400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr15:52071200-52079000 Weak transcription H9 Cell Line embryonic stem cell
34 chr15:52071400-52080200 Strong transcription Primary monocytes fromperipheralblood blood
35 chr15:52072000-52079400 Strong transcription Fetal Brain Female brain
36 chr15:52072800-52080600 Strong transcription Primary B cells from peripheral blood blood
37 chr15:52073000-52079400 Strong transcription Brain Hippocampus Middle brain
38 chr15:52073000-52080400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr15:52073400-52085400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr15:52073600-52079000 Weak transcription Hela-S3 cervix
41 chr15:52074000-52078800 Weak transcription Ovary ovary
42 chr15:52074000-52079400 Weak transcription Lung lung
43 chr15:52074000-52090600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr15:52074000-52100000 Weak transcription NHDF-Ad bronchial
45 chr15:52074400-52079000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr15:52074800-52102800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr15:52075000-52078400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr15:52075000-52079400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr15:52075000-52080600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr15:52075000-52088600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015