Variant report
| Variant | rs2623253 |
|---|---|
| Chromosome Location | chr15:52126378-52126379 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52122400-52126800 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 2 | chr15:52122800-52126600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr15:52122800-52126800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr15:52122800-52129800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr15:52123000-52129800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr15:52123000-52129800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr15:52123000-52130000 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 8 | chr15:52123000-52134000 | Weak transcription | Pancreas | Pancrea |
| 9 | chr15:52123200-52127000 | Weak transcription | Brain Germinal Matrix | brain |
| 10 | chr15:52123200-52128200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 11 | chr15:52123200-52129600 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr15:52123200-52129600 | Weak transcription | Brain Substantia Nigra | brain |
| 13 | chr15:52123200-52129800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 14 | chr15:52123200-52129800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 15 | chr15:52123200-52129800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 16 | chr15:52123200-52129800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 17 | chr15:52123200-52129800 | Weak transcription | Right Ventricle | heart |
| 18 | chr15:52123400-52126400 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 19 | chr15:52123400-52127000 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 20 | chr15:52123400-52129000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 21 | chr15:52123400-52129200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 22 | chr15:52123400-52129600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 23 | chr15:52123400-52129600 | Weak transcription | Fetal Muscle Leg | muscle |
| 24 | chr15:52123400-52133600 | Weak transcription | Colonic Mucosa | Colon |
| 25 | chr15:52123600-52127000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr15:52123600-52128200 | Enhancers | HepG2 | liver |
| 27 | chr15:52123600-52128400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 28 | chr15:52123600-52129600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 29 | chr15:52123600-52140000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 30 | chr15:52123800-52126800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 31 | chr15:52123800-52127000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 32 | chr15:52123800-52127000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 33 | chr15:52123800-52127000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 34 | chr15:52123800-52127200 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 35 | chr15:52123800-52127600 | Weak transcription | Osteobl | bone |
| 36 | chr15:52123800-52129400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 37 | chr15:52123800-52129600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 38 | chr15:52123800-52129800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr15:52123800-52130000 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 40 | chr15:52124000-52126800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 41 | chr15:52124000-52127200 | Weak transcription | Fetal Heart | heart |
| 42 | chr15:52124000-52128800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr15:52124000-52129000 | Weak transcription | Brain Anterior Caudate | brain |
| 44 | chr15:52124000-52129800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 45 | chr15:52124200-52126600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 46 | chr15:52124200-52126800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 47 | chr15:52124200-52126800 | Weak transcription | Gastric | stomach |
| 48 | chr15:52124200-52126800 | Weak transcription | Spleen | Spleen |
| 49 | chr15:52124200-52127600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 50 | chr15:52124200-52128200 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
