Variant report
| Variant | rs2570234 |
|---|---|
| Chromosome Location | chr15:52123440-52123441 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52121400-52123600 | Active TSS | Skeletal Muscle Female | skeletal muscle |
| 2 | chr15:52121400-52123800 | Active TSS | Stomach Smooth Muscle | stomach |
| 3 | chr15:52121400-52124200 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 4 | chr15:52121600-52123600 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 5 | chr15:52121600-52123600 | Active TSS | Fetal Thymus | thymus |
| 6 | chr15:52121600-52123800 | Active TSS | Right Atrium | heart |
| 7 | chr15:52121600-52123800 | Active TSS | HSMM | muscle |
| 8 | chr15:52121600-52124200 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 9 | chr15:52121600-52124200 | Active TSS | NHLF | lung |
| 10 | chr15:52121800-52123600 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 11 | chr15:52121800-52123600 | Active TSS | Muscle Satellite Cultured Cells | -- |
| 12 | chr15:52121800-52123600 | Active TSS | A549 | lung |
| 13 | chr15:52121800-52123600 | Active TSS | Hela-S3 | cervix |
| 14 | chr15:52121800-52123600 | Active TSS | NH-A | brain |
| 15 | chr15:52121800-52123600 | Active TSS | NHEK | skin |
| 16 | chr15:52121800-52123800 | Active TSS | Fetal Intestine Large | intestine |
| 17 | chr15:52121800-52123800 | Active TSS | Placenta Amnion | Placenta Amnion |
| 18 | chr15:52121800-52123800 | Active TSS | Psoas Muscle | Psoas |
| 19 | chr15:52121800-52124000 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 20 | chr15:52121800-52124000 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 21 | chr15:52121800-52124200 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 22 | chr15:52121800-52124800 | Active TSS | HMEC | breast |
| 23 | chr15:52122400-52123600 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 24 | chr15:52122400-52123800 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 25 | chr15:52122400-52126800 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr15:52122600-52123800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 27 | chr15:52122600-52123800 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 28 | chr15:52122600-52123800 | Flanking Active TSS | Thymus | Thymus |
| 29 | chr15:52122600-52124000 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 30 | chr15:52122800-52123600 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr15:52122800-52123600 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 32 | chr15:52122800-52123600 | Flanking Active TSS | Fetal Kidney | kidney |
| 33 | chr15:52122800-52123600 | Weak transcription | Gastric | stomach |
| 34 | chr15:52122800-52123600 | Weak transcription | Spleen | Spleen |
| 35 | chr15:52122800-52123800 | Flanking Active TSS | Osteobl | bone |
| 36 | chr15:52122800-52124000 | Enhancers | Fetal Heart | heart |
| 37 | chr15:52122800-52124000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 38 | chr15:52122800-52124200 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 39 | chr15:52122800-52124200 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 40 | chr15:52122800-52124200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 41 | chr15:52122800-52124200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 42 | chr15:52122800-52124200 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 43 | chr15:52122800-52124200 | Flanking Active TSS | HUVEC | blood vessel |
| 44 | chr15:52122800-52126600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr15:52122800-52126800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 46 | chr15:52122800-52129800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 47 | chr15:52123000-52123600 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 48 | chr15:52123000-52123800 | Flanking Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 49 | chr15:52123000-52123800 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 50 | chr15:52123000-52123800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
