The 2.0 version of rSNPBase

Variant report

Variant rs2436664
Chromosome Location chr15:52146404-52146405
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52130000-52155000 Weak transcription Fetal Muscle Trunk muscle
2 chr15:52130800-52155200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr15:52135800-52155000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr15:52136000-52155200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr15:52136200-52155000 Weak transcription Aorta Aorta
6 chr15:52136600-52153400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr15:52137400-52147400 Weak transcription Brain Hippocampus Middle brain
8 chr15:52137800-52155000 Weak transcription Fetal Intestine Large intestine
9 chr15:52138000-52153400 Weak transcription Esophagus oesophagus
10 chr15:52138000-52155000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr15:52138600-52155000 Weak transcription Fetal Muscle Leg muscle
12 chr15:52139000-52153400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr15:52139200-52147600 Weak transcription Brain Anterior Caudate brain
14 chr15:52139200-52156200 Weak transcription Fetal Intestine Small intestine
15 chr15:52139400-52147200 Weak transcription GM12878-XiMat blood
16 chr15:52139400-52147400 Weak transcription Primary B cells from peripheral blood blood
17 chr15:52139400-52148200 Weak transcription Duodenum Mucosa Duodenum
18 chr15:52139400-52151600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr15:52139400-52152000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr15:52139400-52156600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr15:52139600-52151600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr15:52139600-52151600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr15:52139600-52152000 Weak transcription Primary B cells from cord blood blood
24 chr15:52139600-52154800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr15:52139800-52153400 Weak transcription Fetal Thymus thymus
26 chr15:52139800-52153600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr15:52140000-52151600 Weak transcription Primary hematopoietic stem cells blood
28 chr15:52140000-52155000 Weak transcription NH-A brain
29 chr15:52140200-52148800 Weak transcription Primary T cells from cord blood blood
30 chr15:52140200-52155400 Weak transcription HSMMtube muscle
31 chr15:52140400-52155000 Weak transcription HSMM muscle
32 chr15:52140600-52155400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr15:52141200-52148000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr15:52141400-52147400 Weak transcription Ovary ovary
35 chr15:52141400-52149200 Weak transcription Muscle Satellite Cultured Cells --
36 chr15:52141400-52155400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr15:52141600-52148000 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr15:52141600-52155000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr15:52141600-52166800 Weak transcription Stomach Mucosa stomach
40 chr15:52141800-52154000 Weak transcription Adipose Nuclei Adipose
41 chr15:52141800-52155000 Weak transcription Fetal Stomach stomach
42 chr15:52141800-52176200 Weak transcription Brain Cingulate Gyrus brain
43 chr15:52142000-52151800 Weak transcription Pancreas Pancrea
44 chr15:52142200-52155400 Weak transcription Colon Smooth Muscle Colon
45 chr15:52142600-52149000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr15:52143000-52149600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr15:52143200-52153400 Weak transcription Spleen Spleen
48 chr15:52143400-52147400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr15:52143400-52148000 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr15:52143400-52153400 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015