The 2.0 version of rSNPBase

Variant report

Variant rs17705649
Chromosome Location chr15:52068613-52068614
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52051200-52077600 Weak transcription Psoas Muscle Psoas
2 chr15:52052200-52074600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr15:52052200-52076000 Weak transcription Fetal Brain Male brain
4 chr15:52052200-52101800 Weak transcription Colonic Mucosa Colon
5 chr15:52052400-52073200 Weak transcription NHDF-Ad bronchial
6 chr15:52052400-52078400 Weak transcription Rectal Smooth Muscle rectum
7 chr15:52052600-52106600 Weak transcription HSMM muscle
8 chr15:52053400-52090600 Weak transcription Pancreas Pancrea
9 chr15:52058800-52072800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr15:52060200-52103400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr15:52060400-52069200 Weak transcription Placenta Placenta
12 chr15:52060400-52069800 Strong transcription Stomach Smooth Muscle stomach
13 chr15:52060400-52079200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr15:52060400-52085400 Weak transcription Fetal Lung lung
15 chr15:52060600-52069000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr15:52060600-52073400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr15:52060600-52073600 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr15:52060600-52087400 Weak transcription Gastric stomach
19 chr15:52060600-52088400 Weak transcription Duodenum Mucosa Duodenum
20 chr15:52060600-52091000 Weak transcription Right Ventricle heart
21 chr15:52060800-52074600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr15:52060800-52101200 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr15:52060800-52102600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr15:52060800-52105400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr15:52061000-52069800 Strong transcription Primary T cells from cord blood blood
26 chr15:52061000-52074400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr15:52061600-52073600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr15:52061600-52085400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr15:52061600-52112000 Weak transcription NHLF lung
30 chr15:52061800-52073600 Weak transcription Primary hematopoietic stem cells blood
31 chr15:52061800-52076200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr15:52061800-52077200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr15:52061800-52098600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr15:52063000-52073000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr15:52063000-52074600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr15:52064400-52090400 Weak transcription Left Ventricle heart
37 chr15:52064600-52078400 Weak transcription Fetal Muscle Leg muscle
38 chr15:52064800-52068800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr15:52065600-52090600 Weak transcription Spleen Spleen
40 chr15:52065800-52070000 Strong transcription Primary neutrophils fromperipheralblood blood
41 chr15:52065800-52091000 Weak transcription Esophagus oesophagus
42 chr15:52067000-52068800 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr15:52067000-52069000 Weak transcription Primary T cells fromperipheralblood blood
44 chr15:52067000-52073600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr15:52067200-52069600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr15:52067200-52073600 Weak transcription Primary B cells from cord blood blood
47 chr15:52067200-52090600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr15:52067400-52072800 Weak transcription Fetal Thymus thymus
49 chr15:52067400-52073200 Weak transcription Aorta Aorta
50 chr15:52067400-52073200 Weak transcription Ovary ovary

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015