Variant report

Variant rs2554352
Chromosome Location chr15:52134605-52134606
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52123600-52140000 Enhancers Primary T helper cells fromperipheralblood blood
2 chr15:52124200-52134800 Weak transcription Rectal Smooth Muscle rectum
3 chr15:52124200-52135000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr15:52124200-52135000 Weak transcription Aorta Aorta
5 chr15:52124200-52135400 Weak transcription Thymus Thymus
6 chr15:52125000-52137600 Weak transcription Lung lung
7 chr15:52129000-52136000 Enhancers Fetal Lung lung
8 chr15:52129000-52136600 Enhancers Primary T regulatory cells fromperipheralblood blood
9 chr15:52129000-52140200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr15:52129200-52139800 Enhancers Primary T helper cells PMA-I stimulated --
11 chr15:52129400-52140000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr15:52130000-52155000 Weak transcription Fetal Muscle Trunk muscle
13 chr15:52130200-52135000 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr15:52130400-52134800 Weak transcription H1 Cell Line embryonic stem cell
15 chr15:52130400-52134800 Weak transcription H9 Cell Line embryonic stem cell
16 chr15:52130400-52134800 Weak transcription Osteobl bone
17 chr15:52130400-52135000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr15:52130400-52135000 Weak transcription Brain Substantia Nigra brain
19 chr15:52130400-52135200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr15:52130400-52137000 Weak transcription Brain Cingulate Gyrus brain
21 chr15:52130400-52137600 Weak transcription Placenta Placenta
22 chr15:52130600-52134800 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr15:52130600-52134800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr15:52130600-52134800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr15:52130600-52135000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr15:52130600-52135600 Weak transcription Brain Anterior Caudate brain
27 chr15:52130600-52136200 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr15:52130800-52135000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr15:52130800-52135200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr15:52130800-52136400 Weak transcription Stomach Smooth Muscle stomach
31 chr15:52130800-52137400 Weak transcription Esophagus oesophagus
32 chr15:52130800-52137600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr15:52130800-52155200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr15:52131000-52135000 Weak transcription Fetal Stomach stomach
35 chr15:52131000-52137800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr15:52131200-52135000 Weak transcription Brain Angular Gyrus brain
37 chr15:52131600-52135200 Weak transcription Fetal Thymus thymus
38 chr15:52131600-52137600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr15:52132000-52135000 Enhancers NHEK skin
40 chr15:52132200-52136800 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr15:52132200-52138000 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr15:52132200-52140200 Enhancers Primary T cells from cord blood blood
43 chr15:52132400-52139400 Enhancers Stomach Mucosa stomach
44 chr15:52132600-52134800 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr15:52133000-52134800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr15:52133000-52135200 Enhancers K562 blood
47 chr15:52133000-52136000 Enhancers Primary T killer naive cells fromperipheralblood blood
48 chr15:52133000-52136000 Enhancers Rectal Mucosa Donor 31 rectum
49 chr15:52133000-52136600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr15:52133000-52143600 Enhancers NHDF-Ad bronchial

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