The 2.0 version of rSNPBase

Variant report

Variant rs2570225
Chromosome Location chr15:52178850-52178851
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52155600-52192000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr15:52156000-52211000 Weak transcription Brain Substantia Nigra brain
3 chr15:52163000-52186800 Weak transcription Stomach Smooth Muscle stomach
4 chr15:52163200-52184200 Weak transcription Fetal Muscle Trunk muscle
5 chr15:52163400-52181400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr15:52163400-52186200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr15:52165200-52181800 Weak transcription Esophagus oesophagus
8 chr15:52165800-52183600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr15:52167200-52186200 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr15:52167200-52210800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr15:52167600-52192000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr15:52167600-52199600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr15:52167800-52181400 Weak transcription Primary B cells from peripheral blood blood
14 chr15:52167800-52188600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr15:52168200-52183200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr15:52168600-52188600 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr15:52168800-52183800 Weak transcription Fetal Thymus thymus
18 chr15:52169200-52179600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr15:52169400-52179800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr15:52169800-52181200 Weak transcription Primary monocytes fromperipheralblood blood
21 chr15:52170400-52179800 Weak transcription Primary T cells fromperipheralblood blood
22 chr15:52170400-52186400 Weak transcription Thymus Thymus
23 chr15:52170400-52186600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr15:52170600-52181800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr15:52170600-52184800 Weak transcription Lung lung
26 chr15:52170600-52186000 Weak transcription Left Ventricle heart
27 chr15:52171000-52180200 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr15:52171000-52180400 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr15:52171000-52184400 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr15:52171000-52210800 Weak transcription Right Ventricle heart
31 chr15:52171200-52179800 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr15:52171200-52190200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr15:52171400-52180200 Weak transcription Liver Liver
34 chr15:52171400-52181600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr15:52171600-52179600 Weak transcription HepG2 liver
36 chr15:52171600-52187000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr15:52171800-52183000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr15:52172200-52181800 Weak transcription Primary hematopoietic stem cells blood
39 chr15:52172200-52186000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr15:52172200-52186600 Weak transcription Fetal Kidney kidney
41 chr15:52172200-52190200 Weak transcription Fetal Heart heart
42 chr15:52172200-52192000 Weak transcription Fetal Brain Male brain
43 chr15:52172400-52179800 Weak transcription K562 blood
44 chr15:52172400-52181600 Weak transcription Duodenum Mucosa Duodenum
45 chr15:52172800-52180000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr15:52172800-52208200 Weak transcription Brain Angular Gyrus brain
47 chr15:52173000-52184000 Weak transcription Stomach Mucosa stomach
48 chr15:52173200-52179600 Weak transcription Hela-S3 cervix
49 chr15:52173200-52181600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr15:52173600-52179800 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015