The 2.0 version of rSNPBase

Variant report

Variant rs36108923
Chromosome Location chr6:27792163-27792164
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27788200-27792200 Weak transcription A549 lung
2 chr6:27791000-27792200 Active TSS K562 blood
3 chr6:27791000-27793000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr6:27791200-27792200 Active TSS Primary T helper cells fromperipheralblood blood
5 chr6:27791200-27792200 Active TSS Adipose Nuclei Adipose
6 chr6:27791200-27792200 Active TSS Stomach Smooth Muscle stomach
7 chr6:27791200-27792200 Active TSS Monocytes-CD14+_RO01746 blood
8 chr6:27791200-27792400 Active TSS Primary T cells fromperipheralblood blood
9 chr6:27791200-27792600 Active TSS Aorta Aorta
10 chr6:27791200-27792600 Active TSS Fetal Muscle Trunk muscle
11 chr6:27791200-27792800 Active TSS Breast Myoepithelial Primary Cells Breast
12 chr6:27791200-27792800 Active TSS Muscle Satellite Cultured Cells --
13 chr6:27791200-27792800 Active TSS Fetal Brain Male brain
14 chr6:27791200-27793000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:27791200-27793000 Active TSS Primary T regulatory cells fromperipheralblood blood
16 chr6:27791200-27793000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
17 chr6:27791200-27793000 Bivalent/Poised TSS Colon Smooth Muscle Colon
18 chr6:27791200-27793000 Active TSS Fetal Intestine Large intestine
19 chr6:27791200-27793000 Active TSS Rectal Mucosa Donor 31 rectum
20 chr6:27791200-27793200 Active TSS Colonic Mucosa Colon
21 chr6:27791200-27793200 Active TSS Fetal Adrenal Gland Adrenal Gland
22 chr6:27791200-27793200 Active TSS Fetal Lung lung
23 chr6:27791200-27793200 Active TSS Rectal Smooth Muscle rectum
24 chr6:27791200-27793200 Active TSS Right Atrium heart
25 chr6:27791200-27793400 Active TSS Brain Anterior Caudate brain
26 chr6:27791200-27793400 Active TSS Fetal Muscle Leg muscle
27 chr6:27791200-27793400 Active TSS Fetal Stomach stomach
28 chr6:27791200-27793400 Active TSS Rectal Mucosa Donor 29 rectum
29 chr6:27791200-27793400 Active TSS NHLF lung
30 chr6:27791200-27793600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr6:27791200-27793600 Active TSS iPS-20b Cell Line embryonic stem cell
32 chr6:27791200-27793600 Active TSS GM12878-XiMat blood
33 chr6:27791200-27793800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr6:27791200-27794000 Active TSS HUES6 Cell Line embryonic stem cell
35 chr6:27791200-27794000 Active TSS Fetal Intestine Small intestine
36 chr6:27791200-27794600 Active TSS Fetal Thymus thymus
37 chr6:27791200-27794600 Active TSS Thymus Thymus
38 chr6:27791200-27798000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
39 chr6:27791400-27792200 Active TSS Primary T helper naive cells fromperipheralblood blood
40 chr6:27791400-27792200 Active TSS Primary mononuclear cells fromperipheralblood Blood
41 chr6:27791400-27792200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
42 chr6:27791400-27792400 Active TSS Liver Liver
43 chr6:27791400-27792400 Active TSS Fetal Heart heart
44 chr6:27791400-27792400 Active TSS Placenta Placenta
45 chr6:27791400-27792600 Active TSS Primary Natural Killer cells fromperipheralblood blood
46 chr6:27791400-27792600 Active TSS Primary T killer memory cells from peripheral blood blood
47 chr6:27791400-27792600 Active TSS Pancreatic Islets Pancreatic Islet
48 chr6:27791400-27792600 Active TSS Left Ventricle heart
49 chr6:27791400-27792800 Active TSS Primary T cells from cord blood blood
50 chr6:27791400-27792800 Active TSS Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015