The 2.0 version of rSNPBase

Variant report

Variant rs3768253
Chromosome Location chr1:84875828-84875829
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84872000-84876400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:84872400-84876800 Weak transcription Gastric stomach
3 chr1:84873200-84876400 Weak transcription Osteobl bone
4 chr1:84874000-84876000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:84874000-84876000 Weak transcription HUVEC blood vessel
6 chr1:84874000-84878200 Weak transcription Psoas Muscle Psoas
7 chr1:84874200-84876200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:84874200-84876400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:84874200-84878000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:84874200-84878200 Weak transcription Muscle Satellite Cultured Cells --
11 chr1:84874400-84878200 Weak transcription Aorta Aorta
12 chr1:84874800-84876600 Enhancers Liver Liver
13 chr1:84874800-84877000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:84874800-84877000 Enhancers Fetal Intestine Large intestine
15 chr1:84874800-84877000 Enhancers Fetal Intestine Small intestine
16 chr1:84874800-84877000 Enhancers Stomach Mucosa stomach
17 chr1:84875000-84876800 Enhancers Brain Hippocampus Middle brain
18 chr1:84875400-84877000 Enhancers Rectal Mucosa Donor 31 rectum
19 chr1:84875600-84876400 Enhancers Pancreatic Islets Pancreatic Islet
20 chr1:84875600-84878200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:84875800-84876200 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015