Variant report

Variant	rs3777808
Chromosome Location	chr6:133713214-133713215
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11968392	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12660521	1.00[CEU][hapmap]
rs12662135	1.00[CEU][hapmap]
rs12664235	1.00[CEU][hapmap]
rs17062582	1.00[CEU][hapmap]
rs17062630	1.00[CEU][hapmap]
rs1855988	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1883388	1.00[CEU][hapmap]
rs3777807	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777810	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777822	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs3777828	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs3777856	1.00[CEU][hapmap]
rs3777868	1.00[CEU][hapmap]
rs3777871	1.00[CEU][hapmap]
rs3777873	1.00[CEU][hapmap]
rs3777874	1.00[CEU][hapmap]
rs3777878	1.00[CEU][hapmap]
rs3777879	1.00[CEU][hapmap]
rs3777880	1.00[CEU][hapmap]
rs3777883	1.00[CEU][hapmap]
rs3777884	1.00[CEU][hapmap]
rs3777885	1.00[CEU][hapmap]
rs6899314	1.00[CEU][hapmap]
rs6905892	1.00[CEU][hapmap]
rs6921578	1.00[CEU][hapmap]
rs7773315	1.00[CEU][hapmap]
rs970984	1.00[CEU][hapmap]
rs970985	1.00[CEU][hapmap]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133684600-133717800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:133707600-133714400	Weak transcription	Hela-S3	cervix
3	chr6:133709200-133713600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr6:133709800-133719800	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr6:133710600-133716400	Weak transcription	Psoas Muscle	Psoas
6	chr6:133711200-133717400	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr6:133712000-133714000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr6:133712200-133716200	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr6:133712400-133716000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:133712600-133713800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr6:133712600-133713800	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr6:133712600-133714000	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr6:133712600-133714000	Enhancers	H1 Cell Line	embryonic stem cell
14	chr6:133712600-133714400	Enhancers	H9 Cell Line	embryonic stem cell
15	chr6:133712600-133714400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr6:133712600-133714400	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr6:133712800-133713600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
18	chr6:133712800-133713800	Enhancers	Fetal Muscle Leg	muscle
19	chr6:133712800-133714000	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr6:133712800-133714200	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr6:133712800-133714200	Enhancers	Brain Germinal Matrix	brain
22	chr6:133712800-133714200	Enhancers	NH-A	brain
23	chr6:133713000-133713400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr6:133713000-133713400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
25	chr6:133713000-133713800	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chr6:133713000-133714200	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr6:133713000-133715200	Enhancers	Brain Hippocampus Middle	brain
28	chr6:133713000-133715800	Weak transcription	Fetal Heart	heart
29	chr6:133713200-133713400	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr6:133713200-133714200	Enhancers	Brain Anterior Caudate	brain
31	chr6:133713200-133714200	Enhancers	HSMMtube	muscle
32	chr6:133713200-133715200	Weak transcription	Brain Substantia Nigra	brain
33	chr6:133713200-133716000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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