The 2.0 version of rSNPBase

Variant report

Variant rs3805246
Chromosome Location chr4:144304108-144304109
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144296800-144304600 Enhancers Liver Liver
2 chr4:144297200-144305600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:144298000-144305800 Enhancers Fetal Stomach stomach
4 chr4:144299000-144304600 Enhancers HUES48 Cell Line embryonic stem cell
5 chr4:144300200-144307000 Enhancers Colon Smooth Muscle Colon
6 chr4:144301000-144305000 Weak transcription Fetal Muscle Trunk muscle
7 chr4:144301200-144305200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr4:144301600-144304600 Enhancers Duodenum Mucosa Duodenum
9 chr4:144301600-144304600 Enhancers GM12878-XiMat blood
10 chr4:144301600-144307800 Enhancers Primary B cells from peripheral blood blood
11 chr4:144301800-144304400 Enhancers HUES6 Cell Line embryonic stem cell
12 chr4:144301800-144304400 Enhancers HUES64 Cell Line embryonic stem cell
13 chr4:144301800-144304400 Enhancers Fetal Kidney kidney
14 chr4:144301800-144304600 Enhancers Fetal Intestine Large intestine
15 chr4:144301800-144306000 Enhancers Rectal Mucosa Donor 31 rectum
16 chr4:144302000-144304600 Enhancers K562 blood
17 chr4:144302000-144305800 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr4:144302200-144304200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr4:144302200-144304200 Enhancers Stomach Mucosa stomach
20 chr4:144302200-144304600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr4:144302200-144304600 Enhancers Cortex derived primary cultured neurospheres brain
22 chr4:144302200-144304600 Enhancers Psoas Muscle Psoas
23 chr4:144302200-144304600 Enhancers Small Intestine intestine
24 chr4:144302200-144304600 Enhancers NHEK skin
25 chr4:144302200-144307000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:144302200-144307000 Enhancers NHDF-Ad bronchial
27 chr4:144302400-144304600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr4:144302600-144304400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr4:144302600-144304400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr4:144302600-144304600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr4:144302600-144304800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr4:144302600-144305600 Weak transcription Esophagus oesophagus
33 chr4:144302600-144305600 Weak transcription Spleen Spleen
34 chr4:144302800-144304200 Weak transcription Right Ventricle heart
35 chr4:144302800-144304600 Enhancers Fetal Intestine Small intestine
36 chr4:144302800-144305000 Weak transcription Lung lung
37 chr4:144302800-144305600 Weak transcription Left Ventricle heart
38 chr4:144302800-144308000 Weak transcription Placenta Amnion Placenta Amnion
39 chr4:144302800-144312600 Weak transcription Placenta Placenta
40 chr4:144303000-144305200 Enhancers Primary hematopoietic stem cells blood
41 chr4:144303000-144305600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr4:144303000-144312000 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr4:144303000-144318000 Weak transcription HSMM muscle
44 chr4:144303200-144304200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr4:144303200-144304200 Active TSS Brain Hippocampus Middle brain
46 chr4:144303200-144304800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr4:144303200-144305000 Weak transcription Fetal Muscle Leg muscle
48 chr4:144303200-144305600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr4:144303200-144305600 Weak transcription Pancreas Pancrea
50 chr4:144303200-144308200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015