The 2.0 version of rSNPBase

Variant report

Variant rs3856498
Chromosome Location chr2:37315928-37315929
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37312000-37316800 Weak transcription Spleen Spleen
2 chr2:37312000-37320000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:37312200-37316200 Weak transcription Esophagus oesophagus
4 chr2:37312200-37320000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:37312200-37320000 Weak transcription Lung lung
6 chr2:37312200-37332800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:37312200-37346000 Weak transcription Pancreas Pancrea
8 chr2:37312200-37383200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:37312400-37316800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr2:37312400-37316800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr2:37312400-37316800 Weak transcription Aorta Aorta
12 chr2:37312400-37316800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:37312400-37317200 Weak transcription Rectal Smooth Muscle rectum
14 chr2:37312400-37319400 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:37312400-37320000 Weak transcription Colonic Mucosa Colon
16 chr2:37312400-37321200 Weak transcription Right Ventricle heart
17 chr2:37312400-37332600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:37312400-37332600 Weak transcription H1 Cell Line embryonic stem cell
19 chr2:37312600-37316200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:37312600-37316600 Weak transcription Brain Cingulate Gyrus brain
21 chr2:37312600-37316600 Weak transcription Brain Inferior Temporal Lobe brain
22 chr2:37312600-37316800 Weak transcription Brain Substantia Nigra brain
23 chr2:37312600-37316800 Weak transcription Placenta Amnion Placenta Amnion
24 chr2:37312600-37317000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr2:37312600-37317000 Weak transcription HSMMtube muscle
26 chr2:37312600-37319000 Weak transcription Brain Hippocampus Middle brain
27 chr2:37312600-37319600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr2:37312600-37320000 Weak transcription Ovary ovary
29 chr2:37312600-37329200 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr2:37312600-37332200 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr2:37312600-37332600 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr2:37312800-37316800 Weak transcription Primary hematopoietic stem cells blood
33 chr2:37312800-37321000 Weak transcription Fetal Brain Male brain
34 chr2:37312800-37321400 Weak transcription Fetal Kidney kidney
35 chr2:37313000-37316600 Weak transcription Liver Liver
36 chr2:37313000-37325600 Weak transcription Fetal Heart heart
37 chr2:37313200-37316000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:37313200-37316200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:37313200-37316600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:37313200-37316800 Weak transcription Duodenum Mucosa Duodenum
41 chr2:37313200-37317000 Weak transcription NHLF lung
42 chr2:37313200-37320800 Weak transcription Small Intestine intestine
43 chr2:37313200-37346000 Weak transcription Stomach Mucosa stomach
44 chr2:37313400-37316200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr2:37313400-37316200 Weak transcription NHDF-Ad bronchial
46 chr2:37313400-37316400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:37313400-37316800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr2:37313400-37316800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr2:37313400-37316800 Weak transcription Fetal Brain Female brain
50 chr2:37313400-37316800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015