Variant report

Variant rs42739
Chromosome Location chr5:57747180-57747181
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:57735200-57751400 Weak transcription Psoas Muscle Psoas
2 chr5:57737000-57747400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr5:57737800-57748600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr5:57737800-57749000 Weak transcription Fetal Lung lung
5 chr5:57741400-57750200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr5:57741600-57747200 Weak transcription Esophagus oesophagus
7 chr5:57742200-57747800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr5:57742600-57747400 Weak transcription Fetal Brain Female brain
9 chr5:57742800-57750000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:57742800-57750800 Weak transcription Aorta Aorta
11 chr5:57742800-57751400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr5:57743000-57748800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr5:57743000-57749400 Weak transcription NHDF-Ad bronchial
14 chr5:57743000-57750200 Weak transcription Pancreas Pancrea
15 chr5:57743200-57748400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr5:57743200-57750000 Weak transcription NHLF lung
17 chr5:57743600-57748000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:57743800-57748000 Weak transcription HSMM muscle
19 chr5:57743800-57748400 Weak transcription Fetal Kidney kidney
20 chr5:57743800-57751000 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr5:57744000-57750200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr5:57744400-57749200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr5:57744800-57747200 Weak transcription Fetal Stomach stomach
24 chr5:57745400-57747400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr5:57745600-57748400 Weak transcription Brain Germinal Matrix brain
26 chr5:57745800-57747400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:57746000-57748600 Genic enhancers A549 lung
28 chr5:57746000-57751000 Strong transcription Fetal Muscle Trunk muscle
29 chr5:57746200-57747400 Genic enhancers NH-A brain
30 chr5:57746200-57749600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr5:57746200-57750200 Strong transcription Fetal Muscle Leg muscle
32 chr5:57746400-57748000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr5:57746400-57748800 Enhancers Placenta Placenta
34 chr5:57746400-57749200 Weak transcription Adipose Nuclei Adipose
35 chr5:57746400-57749400 Weak transcription HSMMtube muscle
36 chr5:57746400-57750000 Weak transcription H9 Cell Line embryonic stem cell
37 chr5:57746600-57747200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr5:57746600-57747200 Enhancers Monocytes-CD14+_RO01746 blood
39 chr5:57746600-57747800 Weak transcription HMEC breast
40 chr5:57746600-57748400 Weak transcription NHEK skin
41 chr5:57746600-57749200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr5:57746800-57748000 Weak transcription Osteobl bone
43 chr5:57746800-57748400 Weak transcription Fetal Intestine Large intestine
44 chr5:57746800-57749600 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr5:57746800-57750000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr5:57746800-57750200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr5:57746800-57750400 Weak transcription Fetal Thymus thymus
48 chr5:57746800-57750800 Weak transcription Placenta Amnion Placenta Amnion
49 chr5:57747000-57747400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:57747000-57747800 Weak transcription Muscle Satellite Cultured Cells --

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