Variant report

Variant rs697134
Chromosome Location chr5:57754132-57754133
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:57747800-57754200 Weak transcription Colon Smooth Muscle Colon
2 chr5:57748600-57755000 Transcr. at gene 5' and 3' A549 lung
3 chr5:57748800-57754200 Weak transcription Primary B cells from cord blood blood
4 chr5:57748800-57754600 Weak transcription Spleen Spleen
5 chr5:57749000-57754400 Weak transcription Primary B cells from peripheral blood blood
6 chr5:57749200-57754600 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
7 chr5:57749200-57754800 Transcr. at gene 5' and 3' HUVEC blood vessel
8 chr5:57749200-57755000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr5:57749200-57755000 Transcr. at gene 5' and 3' NH-A brain
10 chr5:57749600-57754800 Transcr. at gene 5' and 3' HSMMtube muscle
11 chr5:57749600-57755000 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr5:57749800-57754600 Transcr. at gene 5' and 3' HMEC breast
13 chr5:57750000-57754600 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr5:57750000-57754600 Transcr. at gene 5' and 3' NHEK skin
15 chr5:57750000-57754800 Transcr. at gene 5' and 3' Fetal Kidney kidney
16 chr5:57750000-57754800 Transcr. at gene 5' and 3' HSMM muscle
17 chr5:57750000-57754800 Transcr. at gene 5' and 3' Osteobl bone
18 chr5:57750000-57756800 Active TSS Brain Inferior Temporal Lobe brain
19 chr5:57750200-57754600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:57750200-57755000 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
21 chr5:57750400-57754200 Weak transcription Stomach Mucosa stomach
22 chr5:57750400-57754600 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
23 chr5:57750600-57754600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr5:57750800-57754400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
25 chr5:57750800-57754800 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
26 chr5:57750800-57756800 Active TSS Right Atrium heart
27 chr5:57751000-57754400 Transcr. at gene 5' and 3' Fetal Lung lung
28 chr5:57751000-57754400 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
29 chr5:57751000-57754400 Transcr. at gene 5' and 3' NHLF lung
30 chr5:57751000-57754600 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:57751000-57756800 Active TSS Brain Angular Gyrus brain
32 chr5:57751400-57754200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:57751400-57754200 Transcr. at gene 5' and 3' Hela-S3 cervix
34 chr5:57751400-57754400 Weak transcription Brain Substantia Nigra brain
35 chr5:57751600-57754200 Weak transcription Pancreas Pancrea
36 chr5:57751600-57754400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:57751600-57754400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr5:57751600-57754600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr5:57751600-57756800 Active TSS Rectal Smooth Muscle rectum
40 chr5:57751600-57756800 Active TSS Right Ventricle heart
41 chr5:57751600-57757000 Active TSS Brain Hippocampus Middle brain
42 chr5:57751800-57756800 Active TSS Brain Cingulate Gyrus brain
43 chr5:57752000-57754200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr5:57752000-57754200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:57752000-57754200 Weak transcription Gastric stomach
46 chr5:57752000-57754200 Weak transcription HepG2 liver
47 chr5:57752000-57754800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
48 chr5:57752000-57756600 Active TSS Aorta Aorta
49 chr5:57752200-57754200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr5:57752200-57754400 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell

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