Variant report

Variant	rs67873319
Chromosome Location	chr5:57792549-57792550
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10044655	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10051454	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10057291	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10060540	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10065306	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10070159	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10471453	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10471454	0.84[EUR][1000 genomes]
rs10472066	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10514852	0.86[ASN][1000 genomes]
rs10940616	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12153002	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13173334	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13174658	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13181639	0.81[ASN][1000 genomes]
rs13184329	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs154492	0.83[AFR][1000 genomes]
rs17773723	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17773753	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28696147	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35522186	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs39967	0.83[AFR][1000 genomes]
rs41088	0.83[AFR][1000 genomes]
rs42740	0.83[AFR][1000 genomes]
rs4412081	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs697134	0.83[AFR][1000 genomes]
rs702709	0.83[AFR][1000 genomes]
rs702720	0.83[AFR][1000 genomes]
rs832631	0.83[AFR][1000 genomes]
rs832636	0.83[AFR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57786800-57795800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr5:57787400-57799400	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr5:57788800-57801600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr5:57789400-57792800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
5	chr5:57790200-57792800	ZNF genes & repeats	Primary B cells from cord blood	blood
6	chr5:57791000-57793400	Weak transcription	Primary hematopoietic stem cells	blood
7	chr5:57791800-57794000	Genic enhancers	Primary B cells from peripheral blood	blood
8	chr5:57791800-57795600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr5:57791800-57798400	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr5:57792000-57793800	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr5:57792200-57793000	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr5:57792400-57795800	Enhancers	Primary neutrophils fromperipheralblood	blood

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