Variant report

Variant	rs4289455
Chromosome Location	chr4:128165909-128165910
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10020135	1.00[EUR][1000 genomes]
rs10471032	1.00[EUR][1000 genomes]
rs11098913	1.00[EUR][1000 genomes]
rs12331820	1.00[EUR][1000 genomes]
rs1480912	1.00[EUR][1000 genomes]
rs28366863	1.00[EUR][1000 genomes]
rs28432794	1.00[EUR][1000 genomes]
rs28434627	1.00[EUR][1000 genomes]
rs28473454	1.00[EUR][1000 genomes]
rs28485376	1.00[EUR][1000 genomes]
rs28546828	1.00[EUR][1000 genomes]
rs28562660	1.00[EUR][1000 genomes]
rs28572072	1.00[EUR][1000 genomes]
rs28587364	1.00[EUR][1000 genomes]
rs28726160	1.00[EUR][1000 genomes]
rs28758907	1.00[EUR][1000 genomes]
rs9992427	1.00[EUR][1000 genomes]
rs9998369	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031024	chr4:128152969-128264539	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128162400-128167000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr4:128162600-128170000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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