Variant report

Variant	rs12331820
Chromosome Location	chr4:128053114-128053115
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10005522	1.00[EUR][1000 genomes]
rs10020135	1.00[EUR][1000 genomes]
rs10471032	1.00[EUR][1000 genomes]
rs11098913	1.00[EUR][1000 genomes]
rs1480912	1.00[EUR][1000 genomes]
rs28366863	1.00[EUR][1000 genomes]
rs28432794	1.00[EUR][1000 genomes]
rs28434627	1.00[EUR][1000 genomes]
rs28452137	1.00[EUR][1000 genomes]
rs28473454	1.00[EUR][1000 genomes]
rs28479022	1.00[EUR][1000 genomes]
rs28485376	1.00[EUR][1000 genomes]
rs28546828	1.00[EUR][1000 genomes]
rs28552074	1.00[EUR][1000 genomes]
rs28562660	1.00[EUR][1000 genomes]
rs28572072	1.00[EUR][1000 genomes]
rs28587364	1.00[EUR][1000 genomes]
rs28726160	1.00[EUR][1000 genomes]
rs28758907	1.00[EUR][1000 genomes]
rs4289455	1.00[EUR][1000 genomes]
rs9992427	1.00[EUR][1000 genomes]
rs9998369	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128047400-128054400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links