Variant report

Variant	rs4289775
Chromosome Location	chr8:130146643-130146644
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:130144005..130147540-chr8:130149814..130152182,3	K562	blood:
2	chr8:130133386..130135625-chr8:130146604..130148790,2	K562	blood:
3	chr8:130146463..130148945-chr8:130156682..130158557,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10093150	0.94[ASN][1000 genomes]
rs10435554	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10956463	0.89[ASN][1000 genomes]
rs10956464	0.94[ASN][1000 genomes]
rs10956465	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12541644	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12543251	0.81[EUR][1000 genomes]
rs12546355	0.88[ASN][1000 genomes]
rs13270479	0.91[ASN][1000 genomes]
rs34871599	0.81[EUR][1000 genomes]
rs4310170	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4333552	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4448233	0.83[ASN][1000 genomes]
rs4524751	0.88[ASN][1000 genomes]
rs4524752	0.88[ASN][1000 genomes]
rs59669561	0.81[EUR][1000 genomes]
rs6470694	0.81[EUR][1000 genomes]
rs6470696	0.88[ASN][1000 genomes]
rs6470698	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6981888	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6982195	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6987260	0.88[ASN][1000 genomes]
rs6989490	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6996505	0.94[ASN][1000 genomes]
rs6996806	0.85[AMR][1000 genomes]
rs7001827	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7004935	0.81[EUR][1000 genomes]
rs7007293	0.88[ASN][1000 genomes]
rs7011330	0.88[ASN][1000 genomes]
rs72609876	0.96[ASN][1000 genomes]
rs7815753	0.91[ASN][1000 genomes]
rs7821655	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7824972	0.88[ASN][1000 genomes]
rs7831436	0.91[ASN][1000 genomes]
rs7839556	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130126400-130160600	Weak transcription	Fetal Thymus	thymus
2	chr8:130146000-130158800	Genic enhancers	Dnd41	blood

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