Variant report

Variant	rs7831436
Chromosome Location	chr8:130131080-130131081
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130128975..130131207-chr8:130134226..130136520,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10093150	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10107597	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10956463	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10956464	0.97[ASN][1000 genomes]
rs10956465	0.89[ASN][1000 genomes]
rs12546355	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12547572	0.88[AMR][1000 genomes]
rs13270479	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4289775	0.91[ASN][1000 genomes]
rs4310170	0.88[ASN][1000 genomes]
rs4448233	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4524751	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4524752	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6470696	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6470697	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6470698	0.88[ASN][1000 genomes]
rs6981888	0.90[ASN][1000 genomes]
rs6982195	0.90[ASN][1000 genomes]
rs6987260	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6996102	0.83[AMR][1000 genomes]
rs6996505	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7001827	0.90[ASN][1000 genomes]
rs7007293	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7011330	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72609876	0.89[ASN][1000 genomes]
rs7815753	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7821655	0.90[ASN][1000 genomes]
rs7824972	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7839556	0.89[ASN][1000 genomes]
rs7846150	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130124200-130133200	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr8:130125000-130131200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr8:130126000-130131200	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr8:130126400-130160600	Weak transcription	Fetal Thymus	thymus
5	chr8:130128600-130135200	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:130130000-130131200	Strong transcription	Dnd41	blood
7	chr8:130130600-130132200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:130130800-130131600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr8:130130800-130132600	Enhancers	Fetal Lung	lung
10	chr8:130131000-130131200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr8:130131000-130131200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
12	chr8:130131000-130131200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr8:130131000-130131600	Enhancers	Muscle Satellite Cultured Cells	--
14	chr8:130131000-130131600	Enhancers	Brain Germinal Matrix	brain
15	chr8:130131000-130131600	Enhancers	NH-A	brain
16	chr8:130131000-130131800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr8:130131000-130131800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr8:130131000-130131800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr8:130131000-130131800	Enhancers	Fetal Heart	heart
20	chr8:130131000-130132000	Enhancers	HUVEC	blood vessel
21	chr8:130131000-130132000	Enhancers	Osteobl	bone

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