Variant report

Variant	rs4301761
Chromosome Location	chr11:105511471-105511472
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1037090	0.85[CHB][hapmap];0.95[JPT][hapmap]
rs10502060	0.93[YRI][hapmap];0.85[AFR][1000 genomes]
rs10791764	0.93[YRI][hapmap];0.87[AFR][1000 genomes]
rs10895846	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10895847	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10895848	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10895849	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10895853	0.84[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs10895856	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs10895870	0.85[JPT][hapmap]
rs11226814	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11226819	0.90[JPT][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes]
rs11226827	0.90[JPT][hapmap]
rs11601239	0.90[JPT][hapmap]
rs11601808	0.86[JPT][hapmap]
rs11606220	0.90[CHB][hapmap];0.95[JPT][hapmap]
rs12290919	0.86[JPT][hapmap]
rs12417624	0.86[JPT][hapmap]
rs12574741	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1445607	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs1445613	0.83[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs1445617	0.85[CHB][hapmap];0.95[JPT][hapmap]
rs1445618	0.90[JPT][hapmap]
rs17104369	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1822989	0.85[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs1942966	0.93[YRI][hapmap];0.86[AFR][1000 genomes]
rs2409574	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3170	1.00[CEU][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4261254	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4480512	0.83[YRI][hapmap]
rs4754133	1.00[CEU][hapmap];0.81[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4754134	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4755107	0.85[CHB][hapmap];0.95[JPT][hapmap]
rs56034429	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58045982	0.86[ASN][1000 genomes]
rs6591137	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs722295	0.84[CHB][hapmap];0.84[ASN][1000 genomes]
rs7926520	0.86[JPT][hapmap]
rs7931588	0.86[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105502600-105513800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr11:105502800-105523200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr11:105506400-105517200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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