The 2.0 version of rSNPBase

Variant report

Variant rs4617506
Chromosome Location chr10:50263543-50263544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:50222800-50279000 Weak transcription Brain Cingulate Gyrus brain
2 chr10:50232400-50279200 Weak transcription Brain Hippocampus Middle brain
3 chr10:50233000-50266000 Weak transcription Colon Smooth Muscle Colon
4 chr10:50243800-50278800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr10:50245600-50264200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr10:50247000-50282600 Weak transcription Brain Angular Gyrus brain
7 chr10:50247800-50271600 Weak transcription Fetal Intestine Small intestine
8 chr10:50254400-50278800 Weak transcription Rectal Smooth Muscle rectum
9 chr10:50255800-50270200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr10:50257200-50266800 Weak transcription Aorta Aorta
11 chr10:50258200-50265800 Weak transcription Fetal Kidney kidney
12 chr10:50259200-50264400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr10:50259800-50264000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr10:50260600-50267800 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr10:50261200-50263600 Enhancers Psoas Muscle Psoas
16 chr10:50261200-50264800 Genic enhancers Fetal Stomach stomach
17 chr10:50261200-50265000 Enhancers Right Atrium heart
18 chr10:50261200-50267400 Enhancers Right Ventricle heart
19 chr10:50261200-50267600 Enhancers Left Ventricle heart
20 chr10:50261200-50267600 Enhancers Ovary ovary
21 chr10:50261400-50264200 Enhancers Skeletal Muscle Female skeletal muscle
22 chr10:50261600-50263800 Enhancers Fetal Lung lung
23 chr10:50261800-50264600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr10:50261800-50264600 Weak transcription Gastric stomach
25 chr10:50262000-50263800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr10:50262000-50267600 Genic enhancers Fetal Muscle Leg muscle
27 chr10:50262600-50263800 Weak transcription Esophagus oesophagus
28 chr10:50262600-50266400 Weak transcription HSMMtube muscle
29 chr10:50262600-50267000 Weak transcription Lung lung
30 chr10:50262800-50267400 Enhancers Adipose Nuclei Adipose
31 chr10:50262800-50271600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr10:50263000-50264200 Strong transcription Fetal Muscle Trunk muscle
33 chr10:50263000-50264800 Enhancers NHDF-Ad bronchial
34 chr10:50263000-50267400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr10:50263200-50264400 Weak transcription Spleen Spleen
36 chr10:50263200-50264800 Genic enhancers Stomach Smooth Muscle stomach
37 chr10:50263400-50263800 Weak transcription NHLF lung
38 chr10:50263400-50264000 Enhancers Skeletal Muscle Male skeletal muscle
39 chr10:50263400-50267600 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr10:50263400-50272200 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015