The 2.0 version of rSNPBase

Variant report

Variant rs4648299
Chromosome Location chr1:186641577-186641578
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186632800-186642000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:186632800-186649000 Weak transcription Fetal Lung lung
3 chr1:186633000-186642200 Weak transcription HMEC breast
4 chr1:186633200-186642800 Weak transcription NHEK skin
5 chr1:186633200-186643600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:186638400-186641800 Weak transcription Hela-S3 cervix
7 chr1:186638600-186642200 Weak transcription A549 lung
8 chr1:186639000-186642200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:186639000-186643600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:186639400-186645000 Weak transcription NHDF-Ad bronchial
11 chr1:186639400-186648400 Weak transcription Primary hematopoietic stem cells blood
12 chr1:186639600-186644600 Weak transcription Small Intestine intestine
13 chr1:186639800-186641600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:186640200-186643200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:186640200-186643600 Weak transcription Stomach Smooth Muscle stomach
16 chr1:186640200-186645000 Strong transcription Primary neutrophils fromperipheralblood blood
17 chr1:186640200-186646600 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr1:186640200-186647800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:186640200-186647800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:186640800-186642000 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:186640800-186647800 Strong transcription Primary monocytes fromperipheralblood blood
22 chr1:186640800-186648000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:186640800-186648200 Weak transcription Brain Angular Gyrus brain
24 chr1:186640800-186649200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:186641400-186642000 Strong transcription Colon Smooth Muscle Colon
26 chr1:186641400-186645000 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr1:186641400-186645400 Strong transcription HUVEC blood vessel
28 chr1:186641400-186646000 Strong transcription NH-A brain
29 chr1:186641400-186647600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015