Variant report

Variant rs4648260
Chromosome Location chr1:186649009-186649010
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186640800-186649200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:186642200-186649200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:186642200-186649200 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:186642400-186649200 Weak transcription Gastric stomach
5 chr1:186644200-186649200 Weak transcription Lung lung
6 chr1:186644400-186649200 Weak transcription Aorta Aorta
7 chr1:186645800-186649200 Weak transcription Spleen Spleen
8 chr1:186646400-186651000 Active TSS Breast Myoepithelial Primary Cells Breast
9 chr1:186646800-186649200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:186647000-186652000 Active TSS Stomach Smooth Muscle stomach
11 chr1:186647600-186651000 Active TSS A549 lung
12 chr1:186647800-186651800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:186648000-186651200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:186648000-186651600 Active TSS Rectal Mucosa Donor 29 rectum
15 chr1:186648000-186651800 Active TSS Colon Smooth Muscle Colon
16 chr1:186648000-186651800 Active TSS NHDF-Ad bronchial
17 chr1:186648200-186649200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:186648200-186649400 Active TSS Brain Angular Gyrus brain
19 chr1:186648200-186650600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:186648200-186651000 Active TSS Fetal Stomach stomach
21 chr1:186648200-186651000 Active TSS Osteobl bone
22 chr1:186648200-186651200 Active TSS NH-A brain
23 chr1:186648400-186649200 Active TSS Fetal Muscle Trunk muscle
24 chr1:186648400-186649400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:186648400-186650400 Bivalent/Poised TSS Primary B cells from cord blood blood
26 chr1:186648400-186650400 Active TSS Esophagus oesophagus
27 chr1:186648400-186650800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:186648400-186650800 Active TSS Colonic Mucosa Colon
29 chr1:186648400-186650800 Bivalent/Poised TSS Fetal Intestine Large intestine
30 chr1:186648400-186651000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr1:186648400-186652000 Active TSS Right Atrium heart
32 chr1:186648600-186649200 Flanking Active TSS Primary monocytes fromperipheralblood blood
33 chr1:186648600-186649400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
34 chr1:186648600-186650400 Active TSS HUVEC blood vessel
35 chr1:186648600-186651000 Active TSS Pancreatic Islets Pancreatic Islet
36 chr1:186648600-186651200 Active TSS Hela-S3 cervix
37 chr1:186648600-186651400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:186648600-186651400 Active TSS NHLF lung
39 chr1:186648600-186651600 Active TSS HMEC breast
40 chr1:186648600-186651800 Active TSS Rectal Smooth Muscle rectum
41 chr1:186648600-186652000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:186648600-186652000 Active TSS Duodenum Smooth Muscle Duodenum
43 chr1:186648600-186652400 Active TSS NHEK skin
44 chr1:186648800-186649200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
45 chr1:186648800-186649200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:186648800-186649200 Active TSS Fetal Muscle Leg muscle
47 chr1:186648800-186649200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr1:186648800-186650000 Active TSS Brain Hippocampus Middle brain
49 chr1:186648800-186650400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
50 chr1:186648800-186650600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin

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