The 2.0 version of rSNPBase

Variant report

Variant rs4652225
Chromosome Location chr1:173846385-173846386
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173838200-173846600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:173838200-173854200 Weak transcription Gastric stomach
3 chr1:173838200-173866000 Weak transcription Small Intestine intestine
4 chr1:173838400-173854200 Weak transcription Esophagus oesophagus
5 chr1:173838400-173854800 Weak transcription Aorta Aorta
6 chr1:173838400-173854800 Weak transcription Right Ventricle heart
7 chr1:173838400-173860200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:173838600-173854800 Weak transcription Rectal Smooth Muscle rectum
9 chr1:173838800-173855800 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:173839000-173848400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:173839000-173850000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:173839000-173854800 Weak transcription Colon Smooth Muscle Colon
13 chr1:173839000-173862800 Weak transcription HMEC breast
14 chr1:173839200-173850000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:173839200-173855000 Weak transcription A549 lung
16 chr1:173839400-173847800 Strong transcription Fetal Muscle Trunk muscle
17 chr1:173839400-173847800 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr1:173839400-173849200 Strong transcription Fetal Stomach stomach
19 chr1:173839400-173850000 Strong transcription HUES48 Cell Line embryonic stem cell
20 chr1:173839600-173854600 Weak transcription Muscle Satellite Cultured Cells --
21 chr1:173840200-173849600 Strong transcription Placenta Placenta
22 chr1:173840200-173854200 Weak transcription Colonic Mucosa Colon
23 chr1:173840200-173854800 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:173840200-173856800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:173840400-173846400 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:173840400-173846400 Weak transcription Brain Germinal Matrix brain
27 chr1:173840400-173846400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:173840400-173855000 Weak transcription Psoas Muscle Psoas
29 chr1:173840600-173849400 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:173840600-173854200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:173840800-173846600 Weak transcription Fetal Thymus thymus
32 chr1:173840800-173848400 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr1:173840800-173854200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:173840800-173854200 Weak transcription Brain Anterior Caudate brain
35 chr1:173840800-173854200 Weak transcription NHLF lung
36 chr1:173840800-173854600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:173840800-173854600 Weak transcription Hela-S3 cervix
38 chr1:173840800-173854800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:173840800-173854800 Weak transcription Brain Angular Gyrus brain
40 chr1:173840800-173855000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr1:173840800-173855000 Weak transcription NHDF-Ad bronchial
42 chr1:173841000-173847000 Weak transcription HUVEC blood vessel
43 chr1:173841000-173854800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:173841000-173854800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:173841000-173864400 Weak transcription Fetal Heart heart
46 chr1:173841000-173868600 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr1:173841200-173854800 Weak transcription Primary hematopoietic stem cells blood
48 chr1:173841400-173849600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:173841600-173846600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:173841600-173847800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015