Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:179553040..179558877-chr1:179559940..179564416,7	MCF-7	breast:
2	chr1:179561671..179563939-chr1:179566117..179567690,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000227141	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10157699	1.00[CHB][hapmap];0.95[YRI][hapmap]
rs10733002	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1079292	0.83[EUR][1000 genomes]
rs10798704	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap]
rs1328595	0.82[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs1410594	0.95[LWK][hapmap];1.00[YRI][hapmap]
rs1999069	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2026014	0.83[EUR][1000 genomes]
rs4391629	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4422967	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4443850	0.96[YRI][hapmap]
rs4628468	0.90[LWK][hapmap];1.00[YRI][hapmap]
rs4651044	0.81[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs4652417	1.00[GIH][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4652423	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs749960	0.83[GIH][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs7514875	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7517766	0.83[GIH][hapmap];1.00[TSI][hapmap]
rs7534216	0.90[LWK][hapmap];0.96[YRI][hapmap]
rs7549258	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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