Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:173750700..173753059-chr4:173755917..173757526,2	K562	blood:
2	chr4:173756774..173758571-chr4:173760264..173762795,2	K562	blood:

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10024969	0.80[CEU][hapmap]
rs10520242	0.80[CEU][hapmap]
rs11932974	0.80[CEU][hapmap]
rs12502278	1.00[CEU][hapmap];0.85[JPT][hapmap];0.92[EUR][1000 genomes]
rs12510484	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12511411	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12511715	0.89[CEU][hapmap]
rs12513314	0.80[CEU][hapmap]
rs12643395	0.80[CEU][hapmap]
rs12643816	0.80[CEU][hapmap]
rs12645440	0.80[CEU][hapmap]
rs12646897	0.80[CEU][hapmap]
rs12651320	0.80[CEU][hapmap]
rs1347702	0.80[CEU][hapmap]
rs1437840	0.89[CEU][hapmap]
rs1540468	0.80[CEU][hapmap]
rs1540471	0.89[CEU][hapmap]
rs1540472	0.80[CEU][hapmap]
rs1551664	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs1551665	1.00[CEU][hapmap]
rs17058705	0.89[CEU][hapmap]
rs17058736	0.89[CEU][hapmap]
rs17058752	0.80[CEU][hapmap]
rs17058802	0.80[CEU][hapmap]
rs17058882	0.88[CEU][hapmap]
rs17058886	0.80[CEU][hapmap]
rs1946797	0.80[CEU][hapmap]
rs2043781	0.88[CEU][hapmap]
rs2125601	1.00[CEU][hapmap]
rs4695991	1.00[CEU][hapmap]
rs4696014	0.80[CEU][hapmap]
rs62340299	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs747493	0.89[CEU][hapmap]
rs750375	0.80[CEU][hapmap]
rs750376	0.89[CEU][hapmap]
rs7699074	0.88[CEU][hapmap]
rs837196	0.80[CEU][hapmap]
rs9312527	0.80[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3327952	chr4:173591786-173805861	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv968039	chr4:173753530-173772714	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv881394	chr4:173757115-173847405	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173747600-173765600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr4:173755800-173759200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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