Variant report

Variant	rs4712121
Chromosome Location	chr6:56149635-56149636
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10498810	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10948981	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs10948988	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12525967	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs12526228	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12530020	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs12665485	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs1925158	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs1925160	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs1925188	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2397212	0.81[CHB][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs2397213	0.80[ASN][1000 genomes]
rs3807013	0.82[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap]
rs3846928	0.90[CHB][hapmap];0.95[JPT][hapmap];0.88[YRI][hapmap];0.91[ASN][1000 genomes]
rs3846931	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs4119562	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs4119563	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs4236138	0.93[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4435945	0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4715602	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs4715606	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60619715	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs66796842	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs72645373	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72645374	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7745111	0.80[ASN][1000 genomes]
rs9349807	0.80[ASN][1000 genomes]
rs9349809	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9370495	0.81[CHB][hapmap];0.81[JPT][hapmap]
rs9370506	0.93[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs9370511	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9370513	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9382598	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs9382600	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9382603	0.80[ASN][1000 genomes]
rs9382604	0.80[ASN][1000 genomes]
rs9382606	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9382617	0.95[AMR][1000 genomes]
rs9396185	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.91[ASN][1000 genomes]
rs994039	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.89[ASN][1000 genomes]
rs994040	0.81[CHB][hapmap];0.83[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:56143600-56156200	Weak transcription	Fetal Lung	lung
2	chr6:56143800-56156200	Weak transcription	Colon Smooth Muscle	Colon

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